Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUXBA0A1W2PPF3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUXBA0A1W2PPF3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUXBA0A1W2PPF3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUXBA0A1W2PPF3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUXBA0A1W2PPF3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.66■□□□□ 0.58
DUXBA0A1W2PPF3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUXBA0A1W2PPF3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.66■□□□□ 0.58
DUXBA0A1W2PPF3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.66■□□□□ 0.58
DUXBA0A1W2PPF3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUXBA0A1W2PPF3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
DUXBA0A1W2PPF3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUXBA0A1W2PPF3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUXBA0A1W2PPF3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
DUXBA0A1W2PPF3 RPS2P35-201ENST00000443417 897 ntBASIC18.66■□□□□ 0.58
DUXBA0A1W2PPF3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.66■□□□□ 0.58
DUXBA0A1W2PPF3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DUXBA0A1W2PPF3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DUXBA0A1W2PPF3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DUXBA0A1W2PPF3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DUXBA0A1W2PPF3 AC137767.1-201ENST00000602918 1920 ntBASIC18.65■□□□□ 0.58
DUXBA0A1W2PPF3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
DUXBA0A1W2PPF3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
DUXBA0A1W2PPF3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
DUXBA0A1W2PPF3 C1orf229-201ENST00000623686 2258 ntBASIC18.65■□□□□ 0.58
DUXBA0A1W2PPF3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.65■□□□□ 0.58
DUXBA0A1W2PPF3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DUXBA0A1W2PPF3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DUXBA0A1W2PPF3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.64■□□□□ 0.58
DUXBA0A1W2PPF3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
DUXBA0A1W2PPF3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DUXBA0A1W2PPF3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DUXBA0A1W2PPF3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DUXBA0A1W2PPF3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.64■□□□□ 0.57
DUXBA0A1W2PPF3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
DUXBA0A1W2PPF3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DUXBA0A1W2PPF3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DUXBA0A1W2PPF3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DUXBA0A1W2PPF3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
DUXBA0A1W2PPF3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DUXBA0A1W2PPF3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.63■□□□□ 0.57
DUXBA0A1W2PPF3 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.63■□□□□ 0.57
DUXBA0A1W2PPF3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.63■□□□□ 0.57
DUXBA0A1W2PPF3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
DUXBA0A1W2PPF3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
DUXBA0A1W2PPF3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DUXBA0A1W2PPF3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DUXBA0A1W2PPF3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
DUXBA0A1W2PPF3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
DUXBA0A1W2PPF3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DUXBA0A1W2PPF3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DUXBA0A1W2PPF3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DUXBA0A1W2PPF3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
DUXBA0A1W2PPF3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DUXBA0A1W2PPF3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
DUXBA0A1W2PPF3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
DUXBA0A1W2PPF3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.62■□□□□ 0.57
DUXBA0A1W2PPF3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DUXBA0A1W2PPF3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DUXBA0A1W2PPF3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
DUXBA0A1W2PPF3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.62■□□□□ 0.57
DUXBA0A1W2PPF3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DUXBA0A1W2PPF3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DUXBA0A1W2PPF3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms