Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC163A0A0D9SF12 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC163A0A0D9SF12 AL022069.1-201ENST00000568025 1636 ntBASIC22.91■■□□□ 1.26
CCDC163A0A0D9SF12 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC163A0A0D9SF12 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC163A0A0D9SF12 YBX1P1-201ENST00000445822 960 ntBASIC22.91■■□□□ 1.26
CCDC163A0A0D9SF12 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC163A0A0D9SF12 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
CCDC163A0A0D9SF12 AC022517.1-201ENST00000592429 346 ntBASIC22.91■■□□□ 1.26
CCDC163A0A0D9SF12 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC163A0A0D9SF12 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.91■■□□□ 1.26
CCDC163A0A0D9SF12 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.91■■□□□ 1.26
CCDC163A0A0D9SF12 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.9■■□□□ 1.26
CCDC163A0A0D9SF12 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC163A0A0D9SF12 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC163A0A0D9SF12 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC163A0A0D9SF12 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.9■■□□□ 1.26
CCDC163A0A0D9SF12 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.9■■□□□ 1.26
CCDC163A0A0D9SF12 MIR3181-201ENST00000578512 73 ntBASIC22.9■■□□□ 1.26
CCDC163A0A0D9SF12 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
CCDC163A0A0D9SF12 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
CCDC163A0A0D9SF12 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC163A0A0D9SF12 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
CCDC163A0A0D9SF12 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.89■■□□□ 1.25
CCDC163A0A0D9SF12 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.89■■□□□ 1.25
CCDC163A0A0D9SF12 AC009086.3-201ENST00000623486 1008 ntBASIC22.89■■□□□ 1.25
CCDC163A0A0D9SF12 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
CCDC163A0A0D9SF12 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.88■■□□□ 1.25
CCDC163A0A0D9SF12 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
CCDC163A0A0D9SF12 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC163A0A0D9SF12 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.88■■□□□ 1.25
CCDC163A0A0D9SF12 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.88■■□□□ 1.25
CCDC163A0A0D9SF12 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.88■■□□□ 1.25
CCDC163A0A0D9SF12 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC163A0A0D9SF12 AL137784.2-201ENST00000607332 1000 ntBASIC22.88■■□□□ 1.25
CCDC163A0A0D9SF12 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC163A0A0D9SF12 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC163A0A0D9SF12 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.87■■□□□ 1.25
CCDC163A0A0D9SF12 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.87■■□□□ 1.25
CCDC163A0A0D9SF12 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.87■■□□□ 1.25
CCDC163A0A0D9SF12 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC163A0A0D9SF12 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.87■■□□□ 1.25
CCDC163A0A0D9SF12 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC163A0A0D9SF12 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC163A0A0D9SF12 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.87■■□□□ 1.25
CCDC163A0A0D9SF12 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.87■■□□□ 1.25
CCDC163A0A0D9SF12 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC163A0A0D9SF12 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC163A0A0D9SF12 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC163A0A0D9SF12 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC163A0A0D9SF12 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.86■■□□□ 1.25
CCDC163A0A0D9SF12 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC163A0A0D9SF12 AC006455.2-201ENST00000429931 906 ntBASIC22.86■■□□□ 1.25
CCDC163A0A0D9SF12 KRT18P5-201ENST00000436075 1291 ntBASIC22.86■■□□□ 1.25
CCDC163A0A0D9SF12 SLC47A1P1-202ENST00000449666 945 ntBASIC22.86■■□□□ 1.25
CCDC163A0A0D9SF12 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC163A0A0D9SF12 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC163A0A0D9SF12 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC163A0A0D9SF12 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC163A0A0D9SF12 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.85■■□□□ 1.25
CCDC163A0A0D9SF12 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.85■■□□□ 1.25
CCDC163A0A0D9SF12 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC163A0A0D9SF12 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.85■■□□□ 1.25
CCDC163A0A0D9SF12 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC163A0A0D9SF12 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.85■■□□□ 1.25
CCDC163A0A0D9SF12 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.84■■□□□ 1.25
CCDC163A0A0D9SF12 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.84■■□□□ 1.25
CCDC163A0A0D9SF12 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.84■■□□□ 1.25
CCDC163A0A0D9SF12 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.84■■□□□ 1.25
CCDC163A0A0D9SF12 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC163A0A0D9SF12 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.83■■□□□ 1.25
CCDC163A0A0D9SF12 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC163A0A0D9SF12 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC163A0A0D9SF12 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.83■■□□□ 1.25
CCDC163A0A0D9SF12 AC123595.1-201ENST00000440769 1046 ntBASIC22.83■■□□□ 1.25
CCDC163A0A0D9SF12 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.83■■□□□ 1.25
CCDC163A0A0D9SF12 IKBKGP1-201ENST00000612193 1073 ntBASIC22.83■■□□□ 1.25
CCDC163A0A0D9SF12 AL358852.1-201ENST00000623174 1268 ntBASIC22.83■■□□□ 1.25
CCDC163A0A0D9SF12 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC163A0A0D9SF12 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CCDC163A0A0D9SF12 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.24
CCDC163A0A0D9SF12 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.83■■□□□ 1.24
CCDC163A0A0D9SF12 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
CCDC163A0A0D9SF12 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CCDC163A0A0D9SF12 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
CCDC163A0A0D9SF12 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.82■■□□□ 1.24
CCDC163A0A0D9SF12 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.82■■□□□ 1.24
CCDC163A0A0D9SF12 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.82■■□□□ 1.24
CCDC163A0A0D9SF12 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
CCDC163A0A0D9SF12 AC126544.1-201ENST00000580842 1059 ntBASIC22.82■■□□□ 1.24
CCDC163A0A0D9SF12 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
CCDC163A0A0D9SF12 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
CCDC163A0A0D9SF12 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC163A0A0D9SF12 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.81■■□□□ 1.24
CCDC163A0A0D9SF12 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.81■■□□□ 1.24
CCDC163A0A0D9SF12 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC163A0A0D9SF12 AC027612.3-201ENST00000413684 1047 ntBASIC22.81■■□□□ 1.24
CCDC163A0A0D9SF12 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.81■■□□□ 1.24
CCDC163A0A0D9SF12 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.81■■□□□ 1.24
CCDC163A0A0D9SF12 MIR6089-201ENST00000616698 64 ntBASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms