Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV20A0A0B4J274 AC090877.2-201ENST00000558441 1738 ntBASIC19.31■□□□□ 0.68
TRAV20A0A0B4J274 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAV20A0A0B4J274 AC097639.1-201ENST00000565519 1891 ntBASIC19.31■□□□□ 0.68
TRAV20A0A0B4J274 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV20A0A0B4J274 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.3■□□□□ 0.68
TRAV20A0A0B4J274 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV20A0A0B4J274 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV20A0A0B4J274 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV20A0A0B4J274 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.3■□□□□ 0.68
TRAV20A0A0B4J274 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAV20A0A0B4J274 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV20A0A0B4J274 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV20A0A0B4J274 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV20A0A0B4J274 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV20A0A0B4J274 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV20A0A0B4J274 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV20A0A0B4J274 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV20A0A0B4J274 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAV20A0A0B4J274 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV20A0A0B4J274 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAV20A0A0B4J274 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TRAV20A0A0B4J274 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRAV20A0A0B4J274 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV20A0A0B4J274 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TRAV20A0A0B4J274 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV20A0A0B4J274 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV20A0A0B4J274 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV20A0A0B4J274 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV20A0A0B4J274 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV20A0A0B4J274 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV20A0A0B4J274 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV20A0A0B4J274 AL136116.3-201ENST00000402907 1138 ntBASIC19.28■□□□□ 0.68
TRAV20A0A0B4J274 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAV20A0A0B4J274 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV20A0A0B4J274 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV20A0A0B4J274 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV20A0A0B4J274 SLC25A24-204ENST00000569674 2357 ntBASIC19.28■□□□□ 0.68
TRAV20A0A0B4J274 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV20A0A0B4J274 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV20A0A0B4J274 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.28■□□□□ 0.68
TRAV20A0A0B4J274 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV20A0A0B4J274 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRAV20A0A0B4J274 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV20A0A0B4J274 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV20A0A0B4J274 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV20A0A0B4J274 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV20A0A0B4J274 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV20A0A0B4J274 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.27■□□□□ 0.68
TRAV20A0A0B4J274 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV20A0A0B4J274 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV20A0A0B4J274 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV20A0A0B4J274 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV20A0A0B4J274 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV20A0A0B4J274 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
TRAV20A0A0B4J274 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.26■□□□□ 0.67
TRAV20A0A0B4J274 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAV20A0A0B4J274 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.26■□□□□ 0.67
TRAV20A0A0B4J274 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV20A0A0B4J274 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.26■□□□□ 0.67
TRAV20A0A0B4J274 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.26■□□□□ 0.67
TRAV20A0A0B4J274 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRAV20A0A0B4J274 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV20A0A0B4J274 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRAV20A0A0B4J274 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV20A0A0B4J274 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV20A0A0B4J274 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV20A0A0B4J274 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAV20A0A0B4J274 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV20A0A0B4J274 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAV20A0A0B4J274 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAV20A0A0B4J274 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV20A0A0B4J274 AL139246.5-201ENST00000606645 996 ntBASIC19.25■□□□□ 0.67
TRAV20A0A0B4J274 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAV20A0A0B4J274 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV20A0A0B4J274 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV20A0A0B4J274 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV20A0A0B4J274 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV20A0A0B4J274 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV20A0A0B4J274 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV20A0A0B4J274 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV20A0A0B4J274 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV20A0A0B4J274 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV20A0A0B4J274 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TRAV20A0A0B4J274 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.24■□□□□ 0.67
TRAV20A0A0B4J274 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TRAV20A0A0B4J274 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV20A0A0B4J274 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV20A0A0B4J274 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV20A0A0B4J274 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV20A0A0B4J274 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV20A0A0B4J274 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRAV20A0A0B4J274 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV20A0A0B4J274 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV20A0A0B4J274 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV20A0A0B4J274 AC096887.2-201ENST00000623443 1957 ntBASIC19.23■□□□□ 0.67
TRAV20A0A0B4J274 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV20A0A0B4J274 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV20A0A0B4J274 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV20A0A0B4J274 MIR6722-201ENST00000617286 78 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms