Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV38-1A0A0B4J264 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV38-1A0A0B4J264 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV38-1A0A0B4J264 LINC01124-201ENST00000409786 2117 ntBASIC19.25■□□□□ 0.67
TRAV38-1A0A0B4J264 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.25■□□□□ 0.67
TRAV38-1A0A0B4J264 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAV38-1A0A0B4J264 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV38-1A0A0B4J264 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV38-1A0A0B4J264 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRAV38-1A0A0B4J264 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAV38-1A0A0B4J264 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV38-1A0A0B4J264 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.25■□□□□ 0.67
TRAV38-1A0A0B4J264 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV38-1A0A0B4J264 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAV38-1A0A0B4J264 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TRAV38-1A0A0B4J264 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV38-1A0A0B4J264 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV38-1A0A0B4J264 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 LINC00543-201ENST00000567234 1845 ntBASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRAV38-1A0A0B4J264 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAV38-1A0A0B4J264 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.23■□□□□ 0.67
TRAV38-1A0A0B4J264 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAV38-1A0A0B4J264 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAV38-1A0A0B4J264 MIR6722-201ENST00000617286 78 ntBASIC19.23■□□□□ 0.67
TRAV38-1A0A0B4J264 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.23■□□□□ 0.67
TRAV38-1A0A0B4J264 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV38-1A0A0B4J264 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV38-1A0A0B4J264 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV38-1A0A0B4J264 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV38-1A0A0B4J264 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV38-1A0A0B4J264 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV38-1A0A0B4J264 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV38-1A0A0B4J264 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV38-1A0A0B4J264 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV38-1A0A0B4J264 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV38-1A0A0B4J264 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.22■□□□□ 0.67
TRAV38-1A0A0B4J264 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TRAV38-1A0A0B4J264 AC010997.5-201ENST00000609182 354 ntBASIC19.22■□□□□ 0.67
TRAV38-1A0A0B4J264 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV38-1A0A0B4J264 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRAV38-1A0A0B4J264 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV38-1A0A0B4J264 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV38-1A0A0B4J264 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRAV38-1A0A0B4J264 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV38-1A0A0B4J264 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV38-1A0A0B4J264 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV38-1A0A0B4J264 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV38-1A0A0B4J264 KRT16P3-201ENST00000439127 1283 ntBASIC19.21■□□□□ 0.67
TRAV38-1A0A0B4J264 UNC93B8-201ENST00000511903 705 ntBASIC19.21■□□□□ 0.67
TRAV38-1A0A0B4J264 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAV38-1A0A0B4J264 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV38-1A0A0B4J264 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAV38-1A0A0B4J264 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV38-1A0A0B4J264 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV38-1A0A0B4J264 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV38-1A0A0B4J264 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRAV38-1A0A0B4J264 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV38-1A0A0B4J264 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
TRAV38-1A0A0B4J264 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV38-1A0A0B4J264 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRAV38-1A0A0B4J264 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV38-1A0A0B4J264 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV38-1A0A0B4J264 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV38-1A0A0B4J264 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.2■□□□□ 0.66
TRAV38-1A0A0B4J264 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV38-1A0A0B4J264 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
TRAV38-1A0A0B4J264 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV38-1A0A0B4J264 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV38-1A0A0B4J264 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV38-1A0A0B4J264 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
TRAV38-1A0A0B4J264 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.19■□□□□ 0.66
TRAV38-1A0A0B4J264 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAV38-1A0A0B4J264 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.19■□□□□ 0.66
TRAV38-1A0A0B4J264 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV38-1A0A0B4J264 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV38-1A0A0B4J264 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV38-1A0A0B4J264 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV38-1A0A0B4J264 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV38-1A0A0B4J264 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.18■□□□□ 0.66
TRAV38-1A0A0B4J264 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV38-1A0A0B4J264 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.18■□□□□ 0.66
TRAV38-1A0A0B4J264 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms