Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TPRKBQ9Y3C4 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TPRKBQ9Y3C4 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
TPRKBQ9Y3C4 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TPRKBQ9Y3C4 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.67□□□□□ -0.22
TPRKBQ9Y3C4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TPRKBQ9Y3C4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TPRKBQ9Y3C4 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TPRKBQ9Y3C4 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TPRKBQ9Y3C4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.67□□□□□ -0.22
TPRKBQ9Y3C4 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TPRKBQ9Y3C4 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TPRKBQ9Y3C4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TPRKBQ9Y3C4 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TPRKBQ9Y3C4 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TPRKBQ9Y3C4 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.67□□□□□ -0.22
TPRKBQ9Y3C4 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 AP3S2-216ENST00000617003 1561 ntBASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 AC011840.2-201ENST00000563063 1520 ntBASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 AC019294.4-201ENST00000561777 2905 ntBASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 AL671277.1-201ENST00000429656 993 ntBASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 KRT18P21-201ENST00000515767 1272 ntBASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 FAM86C2P-203ENST00000528684 1004 ntBASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 AC106730.1-201ENST00000566722 1090 ntBASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 AC018845.2-201ENST00000568326 409 ntBASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 AC148477.8-201ENST00000624298 468 ntBASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TPRKBQ9Y3C4 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 SPDYE17-201ENST00000412399 783 ntBASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 RN7SL589P-201ENST00000481268 310 ntBASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TPRKBQ9Y3C4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms