Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 AQP7P5-201ENST00000428759 1049 ntBASIC19.91■□□□□ 0.78
PHF8Q9UPP1 AQP7P4-201ENST00000447083 1042 ntBASIC19.91■□□□□ 0.78
PHF8Q9UPP1 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 AQP7P2-201ENST00000453967 1041 ntBASIC19.91■□□□□ 0.78
PHF8Q9UPP1 AGPAT5P1-201ENST00000455855 1019 ntBASIC19.91■□□□□ 0.78
PHF8Q9UPP1 HKR1-225ENST00000592168 566 ntTSL 4 BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 NAMA-206ENST00000605377 509 ntTSL 5 BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 AQP7P3-201ENST00000624547 1041 ntBASIC19.91■□□□□ 0.78
PHF8Q9UPP1 AC002044.2-201ENST00000624910 970 ntBASIC19.91■□□□□ 0.78
PHF8Q9UPP1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF8Q9UPP1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 HCG27-204ENST00000424675 895 ntTSL 3 BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 CSNK1G2P1-201ENST00000442675 955 ntBASIC19.9■□□□□ 0.78
PHF8Q9UPP1 RPL35P9-201ENST00000446059 350 ntBASIC19.9■□□□□ 0.78
PHF8Q9UPP1 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 OR5BD1P-201ENST00000532527 817 ntBASIC19.9■□□□□ 0.78
PHF8Q9UPP1 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 CICP23-201ENST00000605013 2741 ntBASIC19.9■□□□□ 0.78
PHF8Q9UPP1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 AC006372.4-201ENST00000624122 1543 ntBASIC19.9■□□□□ 0.78
PHF8Q9UPP1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF8Q9UPP1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.89■□□□□ 0.78
PHF8Q9UPP1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PHF8Q9UPP1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 KHSRPP1-201ENST00000427983 1768 ntBASIC19.89■□□□□ 0.77
PHF8Q9UPP1 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 AC018638.5-201ENST00000450885 754 ntBASIC19.89■□□□□ 0.77
PHF8Q9UPP1 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 RN7SL665P-201ENST00000578793 300 ntBASIC19.89■□□□□ 0.77
PHF8Q9UPP1 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 AC011471.3-201ENST00000623576 402 ntBASIC19.89■□□□□ 0.77
PHF8Q9UPP1 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PHF8Q9UPP1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms