Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 AC016694.1-201ENST00000434179 700 ntBASIC13.12□□□□□ -0.31
CDH20Q9HBT6 EIF3FP3-201ENST00000434851 1086 ntBASIC13.12□□□□□ -0.31
CDH20Q9HBT6 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 RAB43P1-201ENST00000561790 589 ntBASIC13.12□□□□□ -0.31
CDH20Q9HBT6 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 AC239800.4-201ENST00000603712 296 ntBASIC13.12□□□□□ -0.31
CDH20Q9HBT6 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 MIR193BHG-211ENST00000641433 5365 ntBASIC13.12□□□□□ -0.31
CDH20Q9HBT6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDH20Q9HBT6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 BOLA2P3-201ENST00000404566 256 ntBASIC13.11□□□□□ -0.31
CDH20Q9HBT6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.11□□□□□ -0.31
CDH20Q9HBT6 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 GPR53P-205ENST00000457298 1084 ntBASIC13.11□□□□□ -0.31
CDH20Q9HBT6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 DUX4L47-201ENST00000566374 394 ntBASIC13.11□□□□□ -0.31
CDH20Q9HBT6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDH20Q9HBT6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 AC092933.1-201ENST00000393644 945 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms