Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SHANK2-AS3Q9BTD1 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.52□□□□□ -0.56
SHANK2-AS3Q9BTD1 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SHANK2-AS3Q9BTD1 AC016397.2-201ENST00000624848 1985 ntBASIC11.52□□□□□ -0.56
SHANK2-AS3Q9BTD1 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
SHANK2-AS3Q9BTD1 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.52□□□□□ -0.56
SHANK2-AS3Q9BTD1 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SHANK2-AS3Q9BTD1 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.52□□□□□ -0.56
SHANK2-AS3Q9BTD1 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SHANK2-AS3Q9BTD1 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SHANK2-AS3Q9BTD1 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SHANK2-AS3Q9BTD1 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
SHANK2-AS3Q9BTD1 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
SHANK2-AS3Q9BTD1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 AC090505.1-201ENST00000430515 1834 ntBASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 MIR1233-2-201ENST00000408138 82 ntBASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 MIR1233-1-201ENST00000408722 82 ntBASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 TLE1P1-201ENST00000422965 589 ntBASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 TPRX2P-201ENST00000535362 881 ntBASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 AL390754.1-201ENST00000619088 582 ntBASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 AC007431.3-201ENST00000623221 587 ntBASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 AC022144.1-201ENST00000602255 1580 ntBASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC11.52□□□□□ -0.57
SHANK2-AS3Q9BTD1 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 INE2-201ENST00000630399 1874 ntBASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 MBLAC2-202ENST00000514906 1936 ntBASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SHANK2-AS3Q9BTD1 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms