Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
MUC4Q99102 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
MUC4Q99102 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
MUC4Q99102 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC10.96□□□□□ -0.66
MUC4Q99102 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
MUC4Q99102 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
MUC4Q99102 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
MUC4Q99102 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC10.96□□□□□ -0.66
MUC4Q99102 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
MUC4Q99102 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC10.96□□□□□ -0.66
MUC4Q99102 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
MUC4Q99102 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
MUC4Q99102 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC10.96□□□□□ -0.66
MUC4Q99102 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
MUC4Q99102 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
MUC4Q99102 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.66
MUC4Q99102 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.96□□□□□ -0.66
MUC4Q99102 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
MUC4Q99102 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
MUC4Q99102 RN7SL837P-201ENST00000463010 287 ntBASIC10.96□□□□□ -0.66
MUC4Q99102 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC10.96□□□□□ -0.66
MUC4Q99102 GAPDHP40-201ENST00000505218 1006 ntBASIC10.96□□□□□ -0.66
MUC4Q99102 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC10.96□□□□□ -0.66
MUC4Q99102 API5-211ENST00000534695 560 ntTSL 5 BASIC10.96□□□□□ -0.66
MUC4Q99102 TIMM17BP1-201ENST00000545713 516 ntBASIC10.96□□□□□ -0.66
MUC4Q99102 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
MUC4Q99102 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC10.96□□□□□ -0.66
MUC4Q99102 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
MUC4Q99102 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC10.95□□□□□ -0.66
MUC4Q99102 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
MUC4Q99102 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
MUC4Q99102 ST20-AS1-201ENST00000560255 4223 ntBASIC10.95□□□□□ -0.66
MUC4Q99102 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
MUC4Q99102 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 MIR658-201ENST00000385210 100 ntBASIC10.95□□□□□ -0.66
MUC4Q99102 AP006294.1-201ENST00000415407 339 ntBASIC10.95□□□□□ -0.66
MUC4Q99102 TMPRSS11CP-201ENST00000453277 683 ntBASIC10.95□□□□□ -0.66
MUC4Q99102 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC10.95□□□□□ -0.66
MUC4Q99102 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 SNX29P1-201ENST00000548357 1007 ntBASIC10.95□□□□□ -0.66
MUC4Q99102 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.95□□□□□ -0.66
MUC4Q99102 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC10.95□□□□□ -0.66
MUC4Q99102 AL049840.4-201ENST00000602422 811 ntBASIC10.95□□□□□ -0.66
MUC4Q99102 AC099568.2-201ENST00000609194 695 ntBASIC10.95□□□□□ -0.66
MUC4Q99102 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC10.95□□□□□ -0.66
MUC4Q99102 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC10.95□□□□□ -0.66
MUC4Q99102 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC10.95□□□□□ -0.66
MUC4Q99102 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
MUC4Q99102 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC10.95□□□□□ -0.66
MUC4Q99102 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.95□□□□□ -0.66
MUC4Q99102 AC092135.3-201ENST00000624151 1846 ntBASIC10.95□□□□□ -0.66
MUC4Q99102 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC10.95□□□□□ -0.66
MUC4Q99102 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
MUC4Q99102 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC10.95□□□□□ -0.66
MUC4Q99102 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
MUC4Q99102 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
MUC4Q99102 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
MUC4Q99102 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
MUC4Q99102 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
MUC4Q99102 USP4-203ENST00000415188 1454 ntTSL 3 BASIC10.95□□□□□ -0.66
MUC4Q99102 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
MUC4Q99102 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC10.95□□□□□ -0.66
MUC4Q99102 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
MUC4Q99102 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MUC4Q99102 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
MUC4Q99102 AC098614.1-201ENST00000368528 745 ntBASIC10.94□□□□□ -0.66
MUC4Q99102 DFFBP1-201ENST00000433250 979 ntBASIC10.94□□□□□ -0.66
MUC4Q99102 AL512638.1-201ENST00000457493 794 ntBASIC10.94□□□□□ -0.66
MUC4Q99102 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC10.94□□□□□ -0.66
MUC4Q99102 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC10.94□□□□□ -0.66
MUC4Q99102 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms