Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H4Q96RI1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 NCLP1-201ENST00000445357 1963 ntBASIC14.11□□□□□ -0.15
NR1H4Q96RI1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 KRT8P37-201ENST00000451609 1420 ntBASIC14.11□□□□□ -0.15
NR1H4Q96RI1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 KRT18P56-201ENST00000507275 550 ntBASIC14.11□□□□□ -0.15
NR1H4Q96RI1 RNPS1P1-201ENST00000507437 918 ntBASIC14.11□□□□□ -0.15
NR1H4Q96RI1 AC136632.2-201ENST00000512891 861 ntBASIC14.11□□□□□ -0.15
NR1H4Q96RI1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 AC004899.2-201ENST00000622993 3860 ntBASIC14.11□□□□□ -0.15
NR1H4Q96RI1 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H4Q96RI1 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 AC018665.1-201ENST00000622927 1362 ntBASIC14.1□□□□□ -0.15
NR1H4Q96RI1 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 POM121L4P-202ENST00000427789 1891 ntBASIC14.1□□□□□ -0.15
NR1H4Q96RI1 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 AC136604.1-202ENST00000425471 771 ntBASIC14.1□□□□□ -0.15
NR1H4Q96RI1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.1□□□□□ -0.15
NR1H4Q96RI1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms