Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.85□□□□□ -0.19
HPS1Q92902 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.85□□□□□ -0.19
HPS1Q92902 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.85□□□□□ -0.19
HPS1Q92902 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HPS1Q92902 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HPS1Q92902 AC152010.1-201ENST00000415779 2006 ntBASIC13.85□□□□□ -0.19
HPS1Q92902 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.84□□□□□ -0.19
HPS1Q92902 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
HPS1Q92902 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.84□□□□□ -0.19
HPS1Q92902 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
HPS1Q92902 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
HPS1Q92902 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.84□□□□□ -0.19
HPS1Q92902 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.84□□□□□ -0.19
HPS1Q92902 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.84□□□□□ -0.19
HPS1Q92902 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
HPS1Q92902 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.84□□□□□ -0.19
HPS1Q92902 YY1P1-201ENST00000427625 668 ntBASIC13.84□□□□□ -0.19
HPS1Q92902 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 AC093724.1-201ENST00000448659 1027 ntBASIC13.84□□□□□ -0.19
HPS1Q92902 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.84□□□□□ -0.19
HPS1Q92902 AL512638.1-201ENST00000457493 794 ntBASIC13.84□□□□□ -0.19
HPS1Q92902 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.84□□□□□ -0.19
HPS1Q92902 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.84□□□□□ -0.19
HPS1Q92902 AC098859.1-201ENST00000502915 1238 ntBASIC13.84□□□□□ -0.19
HPS1Q92902 TERF1P3-201ENST00000505638 1227 ntBASIC13.84□□□□□ -0.19
HPS1Q92902 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 IGHV3-42-201ENST00000520410 361 ntBASIC13.84□□□□□ -0.19
HPS1Q92902 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.84□□□□□ -0.19
HPS1Q92902 AC024267.1-201ENST00000582320 895 ntBASIC13.84□□□□□ -0.19
HPS1Q92902 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.84□□□□□ -0.19
HPS1Q92902 AC239800.4-201ENST00000603712 296 ntBASIC13.84□□□□□ -0.19
HPS1Q92902 AL451064.1-201ENST00000607718 471 ntBASIC13.84□□□□□ -0.19
HPS1Q92902 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC13.84□□□□□ -0.19
HPS1Q92902 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
HPS1Q92902 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HPS1Q92902 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
HPS1Q92902 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HPS1Q92902 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.84□□□□□ -0.19
HPS1Q92902 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.84□□□□□ -0.19
HPS1Q92902 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HPS1Q92902 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.84□□□□□ -0.19
HPS1Q92902 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
HPS1Q92902 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HPS1Q92902 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
HPS1Q92902 AL031595.1-201ENST00000623969 4709 ntBASIC13.83□□□□□ -0.19
HPS1Q92902 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.83□□□□□ -0.19
HPS1Q92902 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
HPS1Q92902 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.83□□□□□ -0.19
HPS1Q92902 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HPS1Q92902 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
HPS1Q92902 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.83□□□□□ -0.2
HPS1Q92902 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.83□□□□□ -0.2
HPS1Q92902 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HPS1Q92902 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
HPS1Q92902 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 AC130686.1-201ENST00000622936 2466 ntBASIC13.83□□□□□ -0.2
HPS1Q92902 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.83□□□□□ -0.2
HPS1Q92902 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.83□□□□□ -0.2
HPS1Q92902 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.83□□□□□ -0.2
HPS1Q92902 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.83□□□□□ -0.2
HPS1Q92902 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HPS1Q92902 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.83□□□□□ -0.2
HPS1Q92902 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.83□□□□□ -0.2
HPS1Q92902 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.83□□□□□ -0.2
HPS1Q92902 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms