Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.78■□□□□ 0.28
USP6NLQ92738 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 AC023090.2-201ENST00000625182 2110 ntBASIC16.78■□□□□ 0.28
USP6NLQ92738 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.78■□□□□ 0.28
USP6NLQ92738 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.77■□□□□ 0.28
USP6NLQ92738 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP6NLQ92738 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
USP6NLQ92738 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP6NLQ92738 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.77■□□□□ 0.28
USP6NLQ92738 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP6NLQ92738 TSPY26P-202ENST00000565928 3884 ntBASIC16.77■□□□□ 0.28
USP6NLQ92738 ZBED1P1-201ENST00000502364 1930 ntBASIC16.77■□□□□ 0.28
USP6NLQ92738 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.77■□□□□ 0.28
USP6NLQ92738 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP6NLQ92738 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP6NLQ92738 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.77■□□□□ 0.28
USP6NLQ92738 KRT18P36-201ENST00000411618 1276 ntBASIC16.77■□□□□ 0.28
USP6NLQ92738 BANF1P3-201ENST00000412556 261 ntBASIC16.77■□□□□ 0.28
USP6NLQ92738 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP6NLQ92738 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.77■□□□□ 0.28
USP6NLQ92738 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.77■□□□□ 0.28
USP6NLQ92738 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP6NLQ92738 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.77■□□□□ 0.28
USP6NLQ92738 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.77■□□□□ 0.28
USP6NLQ92738 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
USP6NLQ92738 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
USP6NLQ92738 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP6NLQ92738 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.77■□□□□ 0.28
USP6NLQ92738 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
USP6NLQ92738 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP6NLQ92738 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP6NLQ92738 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP6NLQ92738 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP6NLQ92738 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
USP6NLQ92738 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP6NLQ92738 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
USP6NLQ92738 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP6NLQ92738 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP6NLQ92738 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
USP6NLQ92738 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
USP6NLQ92738 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
USP6NLQ92738 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 AC105917.1-201ENST00000506637 2539 ntBASIC16.76■□□□□ 0.27
USP6NLQ92738 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
USP6NLQ92738 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.76■□□□□ 0.27
USP6NLQ92738 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.76■□□□□ 0.27
USP6NLQ92738 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.76■□□□□ 0.27
USP6NLQ92738 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
USP6NLQ92738 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 AC097065.1-201ENST00000425737 517 ntBASIC16.76■□□□□ 0.27
USP6NLQ92738 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.76■□□□□ 0.27
USP6NLQ92738 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.76■□□□□ 0.27
USP6NLQ92738 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.76■□□□□ 0.27
USP6NLQ92738 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.76■□□□□ 0.27
USP6NLQ92738 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.76■□□□□ 0.27
USP6NLQ92738 MIR4522-201ENST00000584932 87 ntBASIC16.76■□□□□ 0.27
USP6NLQ92738 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.76■□□□□ 0.27
USP6NLQ92738 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.76■□□□□ 0.27
USP6NLQ92738 MIR6858-201ENST00000620733 67 ntBASIC16.76■□□□□ 0.27
USP6NLQ92738 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
USP6NLQ92738 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
USP6NLQ92738 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
USP6NLQ92738 SALL4P5-201ENST00000419001 1760 ntBASIC16.76■□□□□ 0.27
USP6NLQ92738 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
USP6NLQ92738 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.76■□□□□ 0.27
USP6NLQ92738 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
USP6NLQ92738 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.75■□□□□ 0.27
USP6NLQ92738 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USP6NLQ92738 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USP6NLQ92738 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
USP6NLQ92738 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
USP6NLQ92738 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
USP6NLQ92738 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USP6NLQ92738 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
USP6NLQ92738 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.75■□□□□ 0.27
USP6NLQ92738 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
USP6NLQ92738 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.75■□□□□ 0.27
USP6NLQ92738 AL583805.1-201ENST00000391389 531 ntBASIC16.75■□□□□ 0.27
USP6NLQ92738 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
USP6NLQ92738 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.75■□□□□ 0.27
USP6NLQ92738 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms