Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 AC242376.1-201ENST00000559033 726 ntBASIC14.92□□□□□ -0.02
HMGB4Q8WW32 MIR3147-201ENST00000577811 66 ntBASIC14.92□□□□□ -0.02
HMGB4Q8WW32 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 AC006453.1-201ENST00000636037 1257 ntBASIC14.92□□□□□ -0.02
HMGB4Q8WW32 Z98259.2-201ENST00000641583 609 ntBASIC14.92□□□□□ -0.02
HMGB4Q8WW32 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 FAM90A7P-201ENST00000382628 1395 ntBASIC14.92□□□□□ -0.02
HMGB4Q8WW32 FAM90A23P-201ENST00000400136 1395 ntBASIC14.92□□□□□ -0.02
HMGB4Q8WW32 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 AP000845.1-201ENST00000581677 2131 ntBASIC14.92□□□□□ -0.02
HMGB4Q8WW32 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 TBC1D3J-201ENST00000620719 1426 ntBASIC14.92□□□□□ -0.02
HMGB4Q8WW32 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.92□□□□□ -0.02
HMGB4Q8WW32 AC092978.1-202ENST00000637590 1327 ntBASIC14.92□□□□□ -0.02
HMGB4Q8WW32 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 AC019193.1-201ENST00000506678 823 ntBASIC14.91□□□□□ -0.02
HMGB4Q8WW32 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 POU5F1P2-201ENST00000521750 823 ntBASIC14.91□□□□□ -0.02
HMGB4Q8WW32 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGB4Q8WW32 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms