Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 SAPCD2P3-201ENST00000455031 850 ntBASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 AC096734.2-201ENST00000562054 433 ntBASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 AC010507.1-201ENST00000633895 436 ntBASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 CSPG4P11-201ENST00000560634 4910 ntBASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC9.73□□□□□ -0.85
SMIM11BQ8TCY0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 EML1-203ENST00000334192 4064 ntTSL 5 BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMIM11BQ8TCY0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms