Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 AC011474.4-201ENST00000623523 2076 ntBASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 AL157414.3-201ENST00000624276 1954 ntBASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 MST1P2-201ENST00000457982 2291 ntBASIC13.22□□□□□ -0.29
DNAAF1Q8NEP3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 TCAF1P1-201ENST00000414990 2232 ntBASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 KRT18P13-201ENST00000400056 1290 ntBASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 AC107890.1-201ENST00000422478 521 ntBASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 AL158211.3-201ENST00000607385 239 ntBASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms