Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 CES1P1-201ENST00000421606 1704 ntBASIC12.51□□□□□ -0.41
COMMD1Q8N668 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD1Q8N668 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD1Q8N668 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.5□□□□□ -0.41
COMMD1Q8N668 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 AL031595.1-201ENST00000623969 4709 ntBASIC12.5□□□□□ -0.41
COMMD1Q8N668 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 AC097359.2-201ENST00000604992 2389 ntBASIC12.5□□□□□ -0.41
COMMD1Q8N668 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 AC087499.6-201ENST00000411576 835 ntBASIC12.5□□□□□ -0.41
COMMD1Q8N668 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 COX20P2-201ENST00000452636 358 ntBASIC12.5□□□□□ -0.41
COMMD1Q8N668 UGT1A2P-201ENST00000454886 866 ntBASIC12.5□□□□□ -0.41
COMMD1Q8N668 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 AC009407.1-201ENST00000568958 598 ntBASIC12.5□□□□□ -0.41
COMMD1Q8N668 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 MTHFR-210ENST00000641407 2387 ntBASIC12.5□□□□□ -0.41
COMMD1Q8N668 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.5□□□□□ -0.41
COMMD1Q8N668 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD1Q8N668 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
COMMD1Q8N668 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COMMD1Q8N668 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COMMD1Q8N668 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COMMD1Q8N668 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COMMD1Q8N668 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
COMMD1Q8N668 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COMMD1Q8N668 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COMMD1Q8N668 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COMMD1Q8N668 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COMMD1Q8N668 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COMMD1Q8N668 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COMMD1Q8N668 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COMMD1Q8N668 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COMMD1Q8N668 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
COMMD1Q8N668 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 AL353779.1-201ENST00000434793 351 ntBASIC12.49□□□□□ -0.41
COMMD1Q8N668 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COMMD1Q8N668 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 AC093004.1-201ENST00000508850 424 ntBASIC12.49□□□□□ -0.41
COMMD1Q8N668 SERBP1P5-201ENST00000510079 1181 ntBASIC12.49□□□□□ -0.41
COMMD1Q8N668 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.49□□□□□ -0.41
COMMD1Q8N668 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COMMD1Q8N668 TIMM17BP1-201ENST00000545713 516 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms