Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 AC126335.2-201ENST00000623362 4637 ntBASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 AC015818.8-201ENST00000587907 1519 ntBASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 TSEN15P1-201ENST00000423257 515 ntBASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 RPL13AP25-201ENST00000484130 612 ntBASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 SRD5A3P1-201ENST00000603021 949 ntBASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
CCDC170Q8IYT3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 AL589987.1-201ENST00000453380 819 ntBASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 AC022616.1-201ENST00000518688 554 ntBASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC170Q8IYT3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms