Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC051619.7-201ENST00000568314 623 ntBASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 MIR4469-201ENST00000583919 79 ntBASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 AP001059.3-201ENST00000619053 235 ntBASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 AC012617.1-204ENST00000586340 2305 ntBASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NUDCD3Q8IVD9 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 AC130686.1-201ENST00000622936 2466 ntBASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 HLA-K-203ENST00000430151 1046 ntBASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 AC004461.2-201ENST00000629517 803 ntBASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUDCD3Q8IVD9 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 PEG13-201ENST00000631594 5667 ntBASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 AC023141.5-201ENST00000458585 616 ntBASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms