Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LYSMD2Q8IV50 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 MKRN5P-201ENST00000445263 1467 ntBASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 AL139010.1-201ENST00000454878 894 ntBASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 AC125807.2-201ENST00000513358 3514 ntBASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.13□□□□□ -0.31
LYSMD2Q8IV50 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 RN7SL832P-201ENST00000607781 1756 ntBASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 AC015819.3-201ENST00000624305 2674 ntBASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 AC104457.1-201ENST00000401024 814 ntBASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 RNA5SP410-201ENST00000516285 106 ntBASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 AL049840.3-201ENST00000602669 611 ntBASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 BCAR1-209ENST00000546196 1340 ntBASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms