Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.31■□□□□ 0.52
COL23A1Q86Y22 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 SAT1-201ENST00000379251 801 ntTSL 2 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 SAT1-202ENST00000379253 909 ntTSL 2 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 SAT1-203ENST00000379254 868 ntTSL 3 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 NAV1-210ENST00000593583 726 ntBASIC18.3■□□□□ 0.52
COL23A1Q86Y22 AC008972.2-201ENST00000606587 494 ntBASIC18.3■□□□□ 0.52
COL23A1Q86Y22 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.3■□□□□ 0.52
COL23A1Q86Y22 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 PHB-210ENST00000511832 1509 ntTSL 2 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 RNVU1-8-201ENST00000364272 125 ntBASIC18.29■□□□□ 0.52
COL23A1Q86Y22 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 RN7SL564P-201ENST00000496309 250 ntBASIC18.29■□□□□ 0.52
COL23A1Q86Y22 OR2A1-AS1-210ENST00000496968 531 ntBASIC18.29■□□□□ 0.52
COL23A1Q86Y22 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 IGHEP1-201ENST00000521393 651 ntBASIC18.29■□□□□ 0.52
COL23A1Q86Y22 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 FUCA1P1-201ENST00000374476 1351 ntBASIC18.29■□□□□ 0.52
COL23A1Q86Y22 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL23A1Q86Y22 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL23A1Q86Y22 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms