Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 AC025181.2-201ENST00000606994 802 ntBASIC13.28□□□□□ -0.28
RTTNQ86VV8 AL118558.3-201ENST00000607414 1079 ntBASIC13.28□□□□□ -0.28
RTTNQ86VV8 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.28□□□□□ -0.28
RTTNQ86VV8 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTTNQ86VV8 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RTTNQ86VV8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
RTTNQ86VV8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.27□□□□□ -0.28
RTTNQ86VV8 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RTTNQ86VV8 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RTTNQ86VV8 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RTTNQ86VV8 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RTTNQ86VV8 ACE3P-201ENST00000423435 1973 ntBASIC13.27□□□□□ -0.28
RTTNQ86VV8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RTTNQ86VV8 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
RTTNQ86VV8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RTTNQ86VV8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RTTNQ86VV8 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RTTNQ86VV8 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RTTNQ86VV8 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.27□□□□□ -0.28
RTTNQ86VV8 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RTTNQ86VV8 AL139094.1-201ENST00000405549 1188 ntBASIC13.27□□□□□ -0.28
RTTNQ86VV8 HINT2P1-201ENST00000419438 481 ntBASIC13.27□□□□□ -0.28
RTTNQ86VV8 AL162726.2-201ENST00000438986 1017 ntBASIC13.27□□□□□ -0.28
RTTNQ86VV8 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RTTNQ86VV8 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.27□□□□□ -0.28
RTTNQ86VV8 PTP4A1P2-201ENST00000546033 454 ntBASIC13.27□□□□□ -0.28
RTTNQ86VV8 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
RTTNQ86VV8 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.27□□□□□ -0.28
RTTNQ86VV8 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.27□□□□□ -0.28
RTTNQ86VV8 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.27□□□□□ -0.28
RTTNQ86VV8 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.27□□□□□ -0.28
RTTNQ86VV8 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.27□□□□□ -0.28
RTTNQ86VV8 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.27□□□□□ -0.28
RTTNQ86VV8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
RTTNQ86VV8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.27□□□□□ -0.28
RTTNQ86VV8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RTTNQ86VV8 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.27□□□□□ -0.29
RTTNQ86VV8 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RTTNQ86VV8 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 MSTO2P-201ENST00000314835 1709 ntBASIC13.27□□□□□ -0.29
RTTNQ86VV8 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.27□□□□□ -0.29
RTTNQ86VV8 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.27□□□□□ -0.29
RTTNQ86VV8 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RTTNQ86VV8 AP001267.2-201ENST00000532619 2086 ntBASIC13.27□□□□□ -0.29
RTTNQ86VV8 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RTTNQ86VV8 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 AC012441.1-201ENST00000446669 685 ntBASIC13.27□□□□□ -0.29
RTTNQ86VV8 MPRIPP1-201ENST00000452433 1089 ntBASIC13.27□□□□□ -0.29
RTTNQ86VV8 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
RTTNQ86VV8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.27□□□□□ -0.29
RTTNQ86VV8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
RTTNQ86VV8 SPCS2P2-201ENST00000603270 608 ntBASIC13.27□□□□□ -0.29
RTTNQ86VV8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.27□□□□□ -0.29
RTTNQ86VV8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RTTNQ86VV8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.27□□□□□ -0.29
RTTNQ86VV8 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTTNQ86VV8 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms