Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 AC007389.4-201ENST00000454674 793 ntBASIC13.8□□□□□ -0.2
ZNF550Q7Z398 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 CU634019.7-201ENST00000624153 1185 ntBASIC13.8□□□□□ -0.2
ZNF550Q7Z398 AC005252.2-201ENST00000624630 1141 ntBASIC13.8□□□□□ -0.2
ZNF550Q7Z398 FP236241.2-201ENST00000624906 1185 ntBASIC13.8□□□□□ -0.2
ZNF550Q7Z398 AC023908.3-201ENST00000564211 3047 ntBASIC13.8□□□□□ -0.2
ZNF550Q7Z398 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF550Q7Z398 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 MIR658-201ENST00000385210 100 ntBASIC13.79□□□□□ -0.2
ZNF550Q7Z398 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 MIR1909-201ENST00000411312 80 ntBASIC13.79□□□□□ -0.2
ZNF550Q7Z398 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 TPT1P11-201ENST00000458482 498 ntBASIC13.79□□□□□ -0.2
ZNF550Q7Z398 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 AC009486.1-201ENST00000569860 813 ntBASIC13.79□□□□□ -0.2
ZNF550Q7Z398 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 AC010319.3-201ENST00000597028 470 ntBASIC13.79□□□□□ -0.2
ZNF550Q7Z398 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF550Q7Z398 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ZNF550Q7Z398 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms