Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 AC078875.1-201ENST00000431907 724 ntBASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 AC073911.3-201ENST00000624401 631 ntBASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 AL137783.1-201ENST00000623494 1896 ntBASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
OTOP1Q7RTM1 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 AC244394.1-201ENST00000435000 1665 ntBASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 AC023157.3-201ENST00000619086 2088 ntBASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 AL627422.1-201ENST00000434104 580 ntBASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 CHCHD2P9-201ENST00000461726 456 ntBASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 NDUFS6P1-201ENST00000485187 316 ntBASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 AC026410.1-201ENST00000507366 1101 ntBASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 MIR5196-201ENST00000578146 115 ntBASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OTOP1Q7RTM1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 AC009093.2-202ENST00000620513 2079 ntBASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 TMCO5B-205ENST00000530020 894 ntBASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 AC012158.2-201ENST00000536546 354 ntBASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
OTOP1Q7RTM1 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms