Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TREML4Q6UXN2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 CICP4-201ENST00000447359 2812 ntBASIC12.41□□□□□ -0.42
TREML4Q6UXN2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 AL162726.2-201ENST00000438986 1017 ntBASIC12.41□□□□□ -0.42
TREML4Q6UXN2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 AL445669.2-201ENST00000454425 421 ntBASIC12.41□□□□□ -0.42
TREML4Q6UXN2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 MRPL22P1-201ENST00000505398 616 ntBASIC12.41□□□□□ -0.42
TREML4Q6UXN2 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 RNA5SP423-201ENST00000517127 109 ntBASIC12.41□□□□□ -0.42
TREML4Q6UXN2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.41□□□□□ -0.42
TREML4Q6UXN2 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TREML4Q6UXN2 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms