Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 HLA-K-203ENST00000430151 1046 ntBASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 AL353779.1-201ENST00000434793 351 ntBASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 IGHV3-42-201ENST00000520410 361 ntBASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 AC036164.1-201ENST00000570544 333 ntBASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 DRD5P1-201ENST00000456605 1438 ntBASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 AC010327.5-201ENST00000586923 3061 ntBASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SMARCD3Q6STE5 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 AC023090.2-201ENST00000625182 2110 ntBASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 MIR1233-2-201ENST00000408138 82 ntBASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 MIR1233-1-201ENST00000408722 82 ntBASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 SRD5A3P1-201ENST00000603021 949 ntBASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 AC093028.1-201ENST00000622998 982 ntBASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 AL138799.1-201ENST00000448213 1675 ntBASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
SMARCD3Q6STE5 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 TSSK5P-201ENST00000423978 907 ntBASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 AC026410.3-201ENST00000514280 936 ntBASIC13.68□□□□□ -0.22
SMARCD3Q6STE5 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms