Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.16□□□□□ -0.3
C11orf88Q6PI97 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 MTHFR-210ENST00000641407 2387 ntBASIC13.15□□□□□ -0.3
C11orf88Q6PI97 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.15□□□□□ -0.3
C11orf88Q6PI97 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 AC125807.1-201ENST00000483097 614 ntBASIC13.15□□□□□ -0.3
C11orf88Q6PI97 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C11orf88Q6PI97 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
C11orf88Q6PI97 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
C11orf88Q6PI97 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 AC113367.3-201ENST00000508316 1912 ntBASIC13.14□□□□□ -0.31
C11orf88Q6PI97 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 INGX-202ENST00000489074 768 ntBASIC13.14□□□□□ -0.31
C11orf88Q6PI97 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 LINC01225-203ENST00000563550 1244 ntBASIC13.14□□□□□ -0.31
C11orf88Q6PI97 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C11orf88Q6PI97 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms