Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USH1GQ495M9 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.08■□□□□ 0.32
USH1GQ495M9 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
USH1GQ495M9 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USH1GQ495M9 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USH1GQ495M9 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USH1GQ495M9 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.08■□□□□ 0.32
USH1GQ495M9 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.08■□□□□ 0.32
USH1GQ495M9 EIF4HP1-201ENST00000453115 687 ntBASIC17.08■□□□□ 0.32
USH1GQ495M9 GCOM2-201ENST00000509133 1104 ntBASIC17.08■□□□□ 0.32
USH1GQ495M9 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.08■□□□□ 0.32
USH1GQ495M9 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.08■□□□□ 0.32
USH1GQ495M9 AC131206.1-201ENST00000538078 1211 ntBASIC17.08■□□□□ 0.32
USH1GQ495M9 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.08■□□□□ 0.32
USH1GQ495M9 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.08■□□□□ 0.32
USH1GQ495M9 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.08■□□□□ 0.32
USH1GQ495M9 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.08■□□□□ 0.32
USH1GQ495M9 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.08■□□□□ 0.32
USH1GQ495M9 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USH1GQ495M9 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
USH1GQ495M9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USH1GQ495M9 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USH1GQ495M9 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
USH1GQ495M9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
USH1GQ495M9 PCDHA3-202ENST00000532566 4594 ntBASIC17.08■□□□□ 0.32
USH1GQ495M9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
USH1GQ495M9 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USH1GQ495M9 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USH1GQ495M9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USH1GQ495M9 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
USH1GQ495M9 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USH1GQ495M9 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
USH1GQ495M9 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.07■□□□□ 0.32
USH1GQ495M9 AC138028.6-201ENST00000616106 1482 ntBASIC17.07■□□□□ 0.32
USH1GQ495M9 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
USH1GQ495M9 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
USH1GQ495M9 CALR4P-201ENST00000431943 946 ntBASIC17.07■□□□□ 0.32
USH1GQ495M9 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.07■□□□□ 0.32
USH1GQ495M9 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.07■□□□□ 0.32
USH1GQ495M9 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.07■□□□□ 0.32
USH1GQ495M9 AC132192.2-201ENST00000596206 1147 ntBASIC17.07■□□□□ 0.32
USH1GQ495M9 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.07■□□□□ 0.32
USH1GQ495M9 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.07■□□□□ 0.32
USH1GQ495M9 AL023803.2-201ENST00000620080 638 ntBASIC17.07■□□□□ 0.32
USH1GQ495M9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.07■□□□□ 0.32
USH1GQ495M9 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 AC004899.1-201ENST00000424687 1714 ntBASIC17.07■□□□□ 0.32
USH1GQ495M9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USH1GQ495M9 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
USH1GQ495M9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USH1GQ495M9 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USH1GQ495M9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USH1GQ495M9 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.06■□□□□ 0.32
USH1GQ495M9 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USH1GQ495M9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USH1GQ495M9 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
USH1GQ495M9 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
USH1GQ495M9 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
USH1GQ495M9 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.06■□□□□ 0.32
USH1GQ495M9 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
USH1GQ495M9 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
USH1GQ495M9 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USH1GQ495M9 KLF2P1-201ENST00000447438 1042 ntBASIC17.06■□□□□ 0.32
USH1GQ495M9 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.06■□□□□ 0.32
USH1GQ495M9 BX284668.4-201ENST00000453917 508 ntBASIC17.06■□□□□ 0.32
USH1GQ495M9 AC005740.2-201ENST00000511085 419 ntBASIC17.06■□□□□ 0.32
USH1GQ495M9 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.06■□□□□ 0.32
USH1GQ495M9 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.06■□□□□ 0.32
USH1GQ495M9 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.06■□□□□ 0.32
USH1GQ495M9 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.06■□□□□ 0.32
USH1GQ495M9 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USH1GQ495M9 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.06■□□□□ 0.32
USH1GQ495M9 BNIP3P13-201ENST00000599968 566 ntBASIC17.06■□□□□ 0.32
USH1GQ495M9 AC138649.2-201ENST00000615886 705 ntBASIC17.06■□□□□ 0.32
USH1GQ495M9 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
USH1GQ495M9 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USH1GQ495M9 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USH1GQ495M9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.06■□□□□ 0.32
USH1GQ495M9 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
USH1GQ495M9 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USH1GQ495M9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms