Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 AC020658.7-201ENST00000624274 2442 ntBASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 AC084121.4-201ENST00000641598 221 ntBASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 AF228730.8-201ENST00000642140 221 ntBASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
ANKRD55Q3KP44 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ANKRD55Q3KP44 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.46□□□□□ -0.42
ANKRD55Q3KP44 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.46□□□□□ -0.42
ANKRD55Q3KP44 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
ANKRD55Q3KP44 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ANKRD55Q3KP44 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
ANKRD55Q3KP44 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ANKRD55Q3KP44 Z82170.1-201ENST00000625081 3192 ntBASIC12.46□□□□□ -0.42
ANKRD55Q3KP44 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.46□□□□□ -0.42
ANKRD55Q3KP44 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ANKRD55Q3KP44 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ANKRD55Q3KP44 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.46□□□□□ -0.42
ANKRD55Q3KP44 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ANKRD55Q3KP44 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
ANKRD55Q3KP44 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ANKRD55Q3KP44 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
ANKRD55Q3KP44 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 KRT8P12-202ENST00000472924 1397 ntBASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 CNN2P11-201ENST00000429351 262 ntBASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 TIMM8BP1-201ENST00000452384 211 ntBASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 AL121723.1-201ENST00000445194 1519 ntBASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms