Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 AC123567.1-201ENST00000548294 1261 ntBASIC9.94□□□□□ -0.82
SYCNQ0VAF6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 AC133539.2-201ENST00000604757 467 ntBASIC9.94□□□□□ -0.82
SYCNQ0VAF6 AJ011932.1-201ENST00000621707 465 ntBASIC9.94□□□□□ -0.82
SYCNQ0VAF6 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 AC018529.2-202ENST00000611482 3087 ntBASIC9.94□□□□□ -0.82
SYCNQ0VAF6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SYCNQ0VAF6 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 AC007541.1-201ENST00000570282 1469 ntBASIC9.93□□□□□ -0.82
SYCNQ0VAF6 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 GOLGA8DP-202ENST00000341390 2184 ntBASIC9.93□□□□□ -0.82
SYCNQ0VAF6 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 HLA-K-203ENST00000430151 1046 ntBASIC9.93□□□□□ -0.82
SYCNQ0VAF6 AC114812.1-204ENST00000449669 728 ntBASIC9.93□□□□□ -0.82
SYCNQ0VAF6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 TMPRSS11CP-201ENST00000453277 683 ntBASIC9.93□□□□□ -0.82
SYCNQ0VAF6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 AC022616.1-201ENST00000518688 554 ntBASIC9.93□□□□□ -0.82
SYCNQ0VAF6 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC9.93□□□□□ -0.82
SYCNQ0VAF6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms