Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRNB3Q05901 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.22□□□□□ -0.13
CHRNB3Q05901 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB3Q05901 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB3Q05901 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB3Q05901 TUBB3P1-201ENST00000405796 1332 ntBASIC14.21□□□□□ -0.13
CHRNB3Q05901 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB3Q05901 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB3Q05901 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB3Q05901 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB3Q05901 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB3Q05901 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB3Q05901 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 KRT18P64-201ENST00000434946 1219 ntBASIC14.21□□□□□ -0.13
CHRNB3Q05901 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 MIR3197-201ENST00000582241 73 ntBASIC14.21□□□□□ -0.13
CHRNB3Q05901 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRNB3Q05901 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRNB3Q05901 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.21□□□□□ -0.14
CHRNB3Q05901 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CHRNB3Q05901 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.21□□□□□ -0.14
CHRNB3Q05901 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CHRNB3Q05901 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CHRNB3Q05901 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CHRNB3Q05901 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
CHRNB3Q05901 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHRNB3Q05901 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.21□□□□□ -0.14
CHRNB3Q05901 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CHRNB3Q05901 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.2□□□□□ -0.14
CHRNB3Q05901 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB3Q05901 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.2□□□□□ -0.14
CHRNB3Q05901 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB3Q05901 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
CHRNB3Q05901 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB3Q05901 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB3Q05901 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB3Q05901 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB3Q05901 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB3Q05901 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB3Q05901 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB3Q05901 Z97205.2-201ENST00000564697 1639 ntBASIC14.2□□□□□ -0.14
CHRNB3Q05901 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CHRNB3Q05901 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB3Q05901 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.2□□□□□ -0.14
CHRNB3Q05901 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB3Q05901 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB3Q05901 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.2□□□□□ -0.14
CHRNB3Q05901 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB3Q05901 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB3Q05901 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHRNB3Q05901 FAM58DP-201ENST00000428076 619 ntBASIC14.2□□□□□ -0.14
CHRNB3Q05901 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.2□□□□□ -0.14
CHRNB3Q05901 KRT18P43-201ENST00000469825 1281 ntBASIC14.2□□□□□ -0.14
CHRNB3Q05901 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.2□□□□□ -0.14
CHRNB3Q05901 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.2□□□□□ -0.14
CHRNB3Q05901 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.2□□□□□ -0.14
CHRNB3Q05901 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms