Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SSBP1Q04837 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
SSBP1Q04837 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SSBP1Q04837 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSBP1Q04837 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.65□□□□□ -0.39
SSBP1Q04837 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.39
SSBP1Q04837 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
SSBP1Q04837 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SSBP1Q04837 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
SSBP1Q04837 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SSBP1Q04837 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP1Q04837 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.64□□□□□ -0.39
SSBP1Q04837 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SSBP1Q04837 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 AC004870.1-201ENST00000315132 882 ntBASIC12.64□□□□□ -0.39
SSBP1Q04837 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 YBX2P1-201ENST00000394192 760 ntBASIC12.64□□□□□ -0.39
SSBP1Q04837 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.64□□□□□ -0.39
SSBP1Q04837 TLE1P1-201ENST00000422965 589 ntBASIC12.64□□□□□ -0.39
SSBP1Q04837 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP1Q04837 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 TIMM8BP1-201ENST00000452384 211 ntBASIC12.64□□□□□ -0.39
SSBP1Q04837 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP1Q04837 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.64□□□□□ -0.39
SSBP1Q04837 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SSBP1Q04837 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.64□□□□□ -0.39
SSBP1Q04837 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.64□□□□□ -0.39
SSBP1Q04837 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 AL445228.2-201ENST00000605589 952 ntBASIC12.64□□□□□ -0.39
SSBP1Q04837 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 AL691432.3-201ENST00000621860 400 ntBASIC12.64□□□□□ -0.39
SSBP1Q04837 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SSBP1Q04837 AL033527.5-202ENST00000641632 1098 ntBASIC12.64□□□□□ -0.39
SSBP1Q04837 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP1Q04837 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP1Q04837 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SSBP1Q04837 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SSBP1Q04837 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SSBP1Q04837 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SSBP1Q04837 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SSBP1Q04837 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
SSBP1Q04837 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SSBP1Q04837 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSBP1Q04837 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP1Q04837 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.64□□□□□ -0.39
SSBP1Q04837 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP1Q04837 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.63□□□□□ -0.39
SSBP1Q04837 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP1Q04837 HSPA8P5-201ENST00000456928 2069 ntBASIC12.63□□□□□ -0.39
SSBP1Q04837 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SSBP1Q04837 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SSBP1Q04837 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP1Q04837 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.63□□□□□ -0.39
SSBP1Q04837 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SSBP1Q04837 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
SSBP1Q04837 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.63□□□□□ -0.39
SSBP1Q04837 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP1Q04837 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms