Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
IRX4P78413 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.64■□□□□ 0.09
IRX4P78413 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.64■□□□□ 0.09
IRX4P78413 KRT8P37-201ENST00000451609 1420 ntBASIC15.64■□□□□ 0.09
IRX4P78413 PHKG1P2-201ENST00000457537 863 ntBASIC15.64■□□□□ 0.09
IRX4P78413 KRT8P13-201ENST00000463294 1010 ntBASIC15.64■□□□□ 0.09
IRX4P78413 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.64■□□□□ 0.09
IRX4P78413 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.64■□□□□ 0.09
IRX4P78413 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.64■□□□□ 0.09
IRX4P78413 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
IRX4P78413 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.64■□□□□ 0.09
IRX4P78413 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.64■□□□□ 0.09
IRX4P78413 AL118558.3-201ENST00000607414 1079 ntBASIC15.64■□□□□ 0.09
IRX4P78413 AC244669.2-201ENST00000612320 853 ntBASIC15.64■□□□□ 0.09
IRX4P78413 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.64■□□□□ 0.09
IRX4P78413 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.64■□□□□ 0.09
IRX4P78413 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
IRX4P78413 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 AC232323.1-201ENST00000540724 2099 ntBASIC15.64■□□□□ 0.09
IRX4P78413 REXO1L5P-201ENST00000622260 2098 ntBASIC15.64■□□□□ 0.09
IRX4P78413 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
IRX4P78413 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
IRX4P78413 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 AC134312.5-201ENST00000568031 1313 ntBASIC15.64■□□□□ 0.09
IRX4P78413 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
IRX4P78413 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.64■□□□□ 0.09
IRX4P78413 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.64■□□□□ 0.09
IRX4P78413 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IRX4P78413 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.63■□□□□ 0.09
IRX4P78413 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.63■□□□□ 0.09
IRX4P78413 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.63■□□□□ 0.09
IRX4P78413 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
IRX4P78413 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.63■□□□□ 0.09
IRX4P78413 MSTO2P-201ENST00000314835 1709 ntBASIC15.63■□□□□ 0.09
IRX4P78413 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
IRX4P78413 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
IRX4P78413 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
IRX4P78413 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.63■□□□□ 0.09
IRX4P78413 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 AC074338.1-201ENST00000416825 156 ntBASIC15.63■□□□□ 0.09
IRX4P78413 TARDBPP1-201ENST00000442013 1203 ntBASIC15.63■□□□□ 0.09
IRX4P78413 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.63■□□□□ 0.09
IRX4P78413 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.63■□□□□ 0.09
IRX4P78413 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.63■□□□□ 0.09
IRX4P78413 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.63■□□□□ 0.09
IRX4P78413 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.63■□□□□ 0.09
IRX4P78413 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.63■□□□□ 0.09
IRX4P78413 RHOQP1-201ENST00000555758 579 ntBASIC15.63■□□□□ 0.09
IRX4P78413 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.63■□□□□ 0.09
IRX4P78413 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.63■□□□□ 0.09
IRX4P78413 AC009486.1-201ENST00000569860 813 ntBASIC15.63■□□□□ 0.09
IRX4P78413 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
IRX4P78413 CLUHP6-201ENST00000580789 941 ntBASIC15.63■□□□□ 0.09
IRX4P78413 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.63■□□□□ 0.09
IRX4P78413 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.63■□□□□ 0.09
IRX4P78413 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.63■□□□□ 0.09
IRX4P78413 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
IRX4P78413 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.63■□□□□ 0.09
IRX4P78413 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.63■□□□□ 0.09
IRX4P78413 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
IRX4P78413 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms