Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.76□□□□□ -0.05
SRP54P61011 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
SRP54P61011 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
SRP54P61011 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SRP54P61011 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.76□□□□□ -0.05
SRP54P61011 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 WASH3P-207ENST00000560956 1394 ntBASIC14.76□□□□□ -0.05
SRP54P61011 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.76□□□□□ -0.05
SRP54P61011 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.76□□□□□ -0.05
SRP54P61011 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
SRP54P61011 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.76□□□□□ -0.05
SRP54P61011 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.76□□□□□ -0.05
SRP54P61011 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 RN7SKP175-201ENST00000408472 289 ntBASIC14.76□□□□□ -0.05
SRP54P61011 BCYRN1-201ENST00000418539 200 ntBASIC14.76□□□□□ -0.05
SRP54P61011 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.76□□□□□ -0.05
SRP54P61011 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.76□□□□□ -0.05
SRP54P61011 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.76□□□□□ -0.05
SRP54P61011 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.76□□□□□ -0.05
SRP54P61011 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.76□□□□□ -0.05
SRP54P61011 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.76□□□□□ -0.05
SRP54P61011 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.76□□□□□ -0.05
SRP54P61011 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.76□□□□□ -0.05
SRP54P61011 AC138696.2-201ENST00000607376 223 ntBASIC14.76□□□□□ -0.05
SRP54P61011 AC007663.3-201ENST00000609632 465 ntBASIC14.76□□□□□ -0.05
SRP54P61011 AC244452.3-201ENST00000636814 210 ntBASIC14.76□□□□□ -0.05
SRP54P61011 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SRP54P61011 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.76□□□□□ -0.05
SRP54P61011 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SRP54P61011 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 AC018735.1-201ENST00000437208 1502 ntBASIC14.76□□□□□ -0.05
SRP54P61011 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.76□□□□□ -0.05
SRP54P61011 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 INE2-201ENST00000630399 1874 ntBASIC14.76□□□□□ -0.05
SRP54P61011 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP54P61011 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.75□□□□□ -0.05
SRP54P61011 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.75□□□□□ -0.05
SRP54P61011 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SRP54P61011 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.75□□□□□ -0.05
SRP54P61011 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.75□□□□□ -0.05
SRP54P61011 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.75□□□□□ -0.05
SRP54P61011 AC126915.1-201ENST00000522847 1038 ntBASIC14.75□□□□□ -0.05
SRP54P61011 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.75□□□□□ -0.05
SRP54P61011 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.75□□□□□ -0.05
SRP54P61011 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.75□□□□□ -0.05
SRP54P61011 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
SRP54P61011 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SRP54P61011 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.75□□□□□ -0.05
SRP54P61011 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.75□□□□□ -0.05
SRP54P61011 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.75□□□□□ -0.05
SRP54P61011 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP54P61011 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.74□□□□□ -0.05
SRP54P61011 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.74□□□□□ -0.05
SRP54P61011 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 AC126177.1-201ENST00000547829 2218 ntBASIC14.74□□□□□ -0.05
SRP54P61011 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.74□□□□□ -0.05
SRP54P61011 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms