Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.81■□□□□ 0.12
MCCD1P59942 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
MCCD1P59942 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.81■□□□□ 0.12
MCCD1P59942 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
MCCD1P59942 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 OR8S1-201ENST00000310194 1080 ntBASIC15.81■□□□□ 0.12
MCCD1P59942 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
MCCD1P59942 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.81■□□□□ 0.12
MCCD1P59942 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
MCCD1P59942 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 MIR663B-201ENST00000408361 115 ntBASIC15.81■□□□□ 0.12
MCCD1P59942 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
MCCD1P59942 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
MCCD1P59942 YBX1P6-201ENST00000442962 1002 ntBASIC15.81■□□□□ 0.12
MCCD1P59942 KRT223P-202ENST00000449164 1292 ntBASIC15.81■□□□□ 0.12
MCCD1P59942 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.81■□□□□ 0.12
MCCD1P59942 TMEM198B-204ENST00000484016 896 ntBASIC15.81■□□□□ 0.12
MCCD1P59942 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.81■□□□□ 0.12
MCCD1P59942 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
MCCD1P59942 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.81■□□□□ 0.12
MCCD1P59942 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.81■□□□□ 0.12
MCCD1P59942 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.81■□□□□ 0.12
MCCD1P59942 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.81■□□□□ 0.12
MCCD1P59942 AC017083.2-201ENST00000608069 979 ntBASIC15.81■□□□□ 0.12
MCCD1P59942 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.81■□□□□ 0.12
MCCD1P59942 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
MCCD1P59942 Z99916.3-201ENST00000623422 1080 ntBASIC15.81■□□□□ 0.12
MCCD1P59942 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.81■□□□□ 0.12
MCCD1P59942 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.81■□□□□ 0.12
MCCD1P59942 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
MCCD1P59942 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 PID1-202ENST00000392054 2745 ntTSL 2 BASIC15.81■□□□□ 0.12
MCCD1P59942 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.81■□□□□ 0.12
MCCD1P59942 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MCCD1P59942 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
MCCD1P59942 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
MCCD1P59942 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
MCCD1P59942 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.8■□□□□ 0.12
MCCD1P59942 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.8■□□□□ 0.12
MCCD1P59942 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
MCCD1P59942 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 AL008718.2-201ENST00000609206 1313 ntBASIC15.8■□□□□ 0.12
MCCD1P59942 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.8■□□□□ 0.12
MCCD1P59942 SSR1P1-201ENST00000407630 814 ntBASIC15.8■□□□□ 0.12
MCCD1P59942 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.8■□□□□ 0.12
MCCD1P59942 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.8■□□□□ 0.12
MCCD1P59942 GOLGA2P4-201ENST00000441462 777 ntBASIC15.8■□□□□ 0.12
MCCD1P59942 AC012441.2-201ENST00000444843 739 ntBASIC15.8■□□□□ 0.12
MCCD1P59942 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.8■□□□□ 0.12
MCCD1P59942 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.8■□□□□ 0.12
MCCD1P59942 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.8■□□□□ 0.12
MCCD1P59942 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
MCCD1P59942 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.8■□□□□ 0.12
MCCD1P59942 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
MCCD1P59942 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.8■□□□□ 0.12
MCCD1P59942 AL160314.3-201ENST00000556041 767 ntBASIC15.8■□□□□ 0.12
MCCD1P59942 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 AC133552.6-201ENST00000613406 534 ntBASIC15.8■□□□□ 0.12
MCCD1P59942 AC022748.3-201ENST00000621828 275 ntBASIC15.8■□□□□ 0.12
MCCD1P59942 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MCCD1P59942 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.8■□□□□ 0.12
MCCD1P59942 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms