Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 TPM4P1-201ENST00000436100 807 ntBASIC13.05□□□□□ -0.32
CLDN12P56749 MKNK2P1-201ENST00000437526 628 ntBASIC13.05□□□□□ -0.32
CLDN12P56749 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 CEND1P1-201ENST00000451006 455 ntBASIC13.05□□□□□ -0.32
CLDN12P56749 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN12P56749 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.05□□□□□ -0.32
CLDN12P56749 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CLDN12P56749 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.05□□□□□ -0.32
CLDN12P56749 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.05□□□□□ -0.32
CLDN12P56749 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CLDN12P56749 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.05□□□□□ -0.32
CLDN12P56749 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.05□□□□□ -0.32
CLDN12P56749 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN12P56749 INE2-201ENST00000630399 1874 ntBASIC13.05□□□□□ -0.32
CLDN12P56749 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CLDN12P56749 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN12P56749 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN12P56749 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN12P56749 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CLDN12P56749 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CLDN12P56749 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN12P56749 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 TCAF1P1-201ENST00000414990 2232 ntBASIC13.04□□□□□ -0.32
CLDN12P56749 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
CLDN12P56749 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN12P56749 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 TOMM22P5-201ENST00000416399 439 ntBASIC13.04□□□□□ -0.32
CLDN12P56749 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.04□□□□□ -0.32
CLDN12P56749 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 SERBP1P3-201ENST00000459980 809 ntBASIC13.04□□□□□ -0.32
CLDN12P56749 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.04□□□□□ -0.32
CLDN12P56749 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN12P56749 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN12P56749 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.04□□□□□ -0.32
CLDN12P56749 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.04□□□□□ -0.32
CLDN12P56749 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN12P56749 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN12P56749 MIR6080-201ENST00000617359 66 ntBASIC13.04□□□□□ -0.32
CLDN12P56749 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN12P56749 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 DMBT1P1-203ENST00000636837 4628 ntBASIC13.04□□□□□ -0.32
CLDN12P56749 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CLDN12P56749 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 MEX3B-202ENST00000558133 4333 ntBASIC13.04□□□□□ -0.32
CLDN12P56749 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CLDN12P56749 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 CETN4P-206ENST00000642099 2168 ntBASIC13.04□□□□□ -0.32
CLDN12P56749 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
CLDN12P56749 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.04□□□□□ -0.32
CLDN12P56749 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CLDN12P56749 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.04□□□□□ -0.32
CLDN12P56749 AC027612.1-201ENST00000445234 2395 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms