Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDKN2DP55273 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.73□□□□□ -0.05
CDKN2DP55273 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDKN2DP55273 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDKN2DP55273 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDKN2DP55273 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CDKN2DP55273 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 MYADML-201ENST00000474610 2147 ntBASIC14.72□□□□□ -0.05
CDKN2DP55273 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CDKN2DP55273 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 MRPL37P1-201ENST00000592451 1337 ntBASIC14.72□□□□□ -0.05
CDKN2DP55273 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.72□□□□□ -0.05
CDKN2DP55273 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CDKN2DP55273 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.72□□□□□ -0.05
CDKN2DP55273 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.72□□□□□ -0.05
CDKN2DP55273 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.72□□□□□ -0.05
CDKN2DP55273 HMGN1P19-201ENST00000436976 333 ntBASIC14.72□□□□□ -0.05
CDKN2DP55273 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.72□□□□□ -0.05
CDKN2DP55273 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.72□□□□□ -0.05
CDKN2DP55273 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.72□□□□□ -0.05
CDKN2DP55273 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.72□□□□□ -0.05
CDKN2DP55273 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.72□□□□□ -0.05
CDKN2DP55273 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.72□□□□□ -0.05
CDKN2DP55273 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CDKN2DP55273 AC138466.3-201ENST00000619983 221 ntBASIC14.72□□□□□ -0.05
CDKN2DP55273 ENPP7P14-201ENST00000621765 1040 ntBASIC14.72□□□□□ -0.05
CDKN2DP55273 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.72□□□□□ -0.05
CDKN2DP55273 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.72□□□□□ -0.05
CDKN2DP55273 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.72□□□□□ -0.05
CDKN2DP55273 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CDKN2DP55273 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CDKN2DP55273 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.72□□□□□ -0.05
CDKN2DP55273 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDKN2DP55273 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.71□□□□□ -0.05
CDKN2DP55273 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDKN2DP55273 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDKN2DP55273 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDKN2DP55273 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CDKN2DP55273 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDKN2DP55273 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 AP006294.1-201ENST00000415407 339 ntBASIC14.71□□□□□ -0.05
CDKN2DP55273 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.71□□□□□ -0.05
CDKN2DP55273 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.71□□□□□ -0.05
CDKN2DP55273 AL391280.1-201ENST00000506969 1062 ntBASIC14.71□□□□□ -0.05
CDKN2DP55273 AP001889.1-201ENST00000525414 633 ntBASIC14.71□□□□□ -0.05
CDKN2DP55273 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CDKN2DP55273 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.71□□□□□ -0.05
CDKN2DP55273 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.71□□□□□ -0.05
CDKN2DP55273 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.71□□□□□ -0.05
CDKN2DP55273 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.71□□□□□ -0.05
CDKN2DP55273 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.71□□□□□ -0.05
CDKN2DP55273 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CDKN2DP55273 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDKN2DP55273 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
CDKN2DP55273 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
CDKN2DP55273 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
CDKN2DP55273 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
CDKN2DP55273 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.71□□□□□ -0.06
CDKN2DP55273 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDKN2DP55273 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2DP55273 AC015688.4-201ENST00000580780 1647 ntBASIC14.7□□□□□ -0.06
CDKN2DP55273 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2DP55273 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2DP55273 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDKN2DP55273 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDKN2DP55273 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms