Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.03□□□□□ -0.32
ATP1B3P54709 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.03□□□□□ -0.32
ATP1B3P54709 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.03□□□□□ -0.32
ATP1B3P54709 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.03□□□□□ -0.32
ATP1B3P54709 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ATP1B3P54709 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 DMBT1P1-203ENST00000636837 4628 ntBASIC13.03□□□□□ -0.32
ATP1B3P54709 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.03□□□□□ -0.32
ATP1B3P54709 COL6A4P2-202ENST00000504443 2753 ntBASIC13.03□□□□□ -0.32
ATP1B3P54709 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.03□□□□□ -0.32
ATP1B3P54709 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.03□□□□□ -0.32
ATP1B3P54709 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.03□□□□□ -0.32
ATP1B3P54709 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.03□□□□□ -0.32
ATP1B3P54709 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.03□□□□□ -0.32
ATP1B3P54709 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.03□□□□□ -0.32
ATP1B3P54709 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.03□□□□□ -0.32
ATP1B3P54709 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.03□□□□□ -0.32
ATP1B3P54709 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.03□□□□□ -0.32
ATP1B3P54709 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.03□□□□□ -0.32
ATP1B3P54709 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.03□□□□□ -0.32
ATP1B3P54709 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
ATP1B3P54709 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ATP1B3P54709 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.03□□□□□ -0.32
ATP1B3P54709 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
ATP1B3P54709 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ATP1B3P54709 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
ATP1B3P54709 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
ATP1B3P54709 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
ATP1B3P54709 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ATP1B3P54709 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.03□□□□□ -0.32
ATP1B3P54709 AL031595.1-201ENST00000623969 4709 ntBASIC13.03□□□□□ -0.32
ATP1B3P54709 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATP1B3P54709 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ATP1B3P54709 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATP1B3P54709 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATP1B3P54709 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.02□□□□□ -0.32
ATP1B3P54709 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATP1B3P54709 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATP1B3P54709 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.02□□□□□ -0.32
ATP1B3P54709 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATP1B3P54709 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ATP1B3P54709 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.02□□□□□ -0.32
ATP1B3P54709 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.02□□□□□ -0.32
ATP1B3P54709 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATP1B3P54709 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATP1B3P54709 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
ATP1B3P54709 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.02□□□□□ -0.33
ATP1B3P54709 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.02□□□□□ -0.33
ATP1B3P54709 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ATP1B3P54709 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ATP1B3P54709 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.02□□□□□ -0.33
ATP1B3P54709 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.02□□□□□ -0.33
ATP1B3P54709 NUS1P3-201ENST00000423502 862 ntBASIC13.02□□□□□ -0.33
ATP1B3P54709 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.02□□□□□ -0.33
ATP1B3P54709 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.02□□□□□ -0.33
ATP1B3P54709 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.02□□□□□ -0.33
ATP1B3P54709 AL589987.1-201ENST00000453380 819 ntBASIC13.02□□□□□ -0.33
ATP1B3P54709 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.02□□□□□ -0.33
ATP1B3P54709 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.02□□□□□ -0.33
ATP1B3P54709 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.02□□□□□ -0.33
ATP1B3P54709 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.02□□□□□ -0.33
ATP1B3P54709 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.02□□□□□ -0.33
ATP1B3P54709 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.33
ATP1B3P54709 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
ATP1B3P54709 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ATP1B3P54709 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.02□□□□□ -0.33
ATP1B3P54709 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.02□□□□□ -0.33
ATP1B3P54709 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ATP1B3P54709 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ATP1B3P54709 DRD5P1-201ENST00000456605 1438 ntBASIC13.02□□□□□ -0.33
ATP1B3P54709 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms