Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCR9P51686 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCR9P51686 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CCR9P51686 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.2□□□□□ -0.3
CCR9P51686 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.2□□□□□ -0.3
CCR9P51686 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CCR9P51686 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CCR9P51686 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CCR9P51686 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CCR9P51686 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CCR9P51686 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.2□□□□□ -0.3
CCR9P51686 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.2□□□□□ -0.3
CCR9P51686 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.2□□□□□ -0.3
CCR9P51686 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.2□□□□□ -0.3
CCR9P51686 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.2□□□□□ -0.3
CCR9P51686 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.2□□□□□ -0.3
CCR9P51686 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CCR9P51686 KLF2P3-201ENST00000451977 1087 ntBASIC13.2□□□□□ -0.3
CCR9P51686 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.2□□□□□ -0.3
CCR9P51686 AC125807.1-201ENST00000483097 614 ntBASIC13.2□□□□□ -0.3
CCR9P51686 AC026410.3-201ENST00000514280 936 ntBASIC13.2□□□□□ -0.3
CCR9P51686 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.2□□□□□ -0.3
CCR9P51686 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.2□□□□□ -0.3
CCR9P51686 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CCR9P51686 SNHG9-202ENST00000564014 471 ntBASIC13.2□□□□□ -0.3
CCR9P51686 Z92544.3-201ENST00000624747 417 ntBASIC13.2□□□□□ -0.3
CCR9P51686 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.2□□□□□ -0.3
CCR9P51686 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CCR9P51686 KRT8P22-201ENST00000562317 1415 ntBASIC13.2□□□□□ -0.3
CCR9P51686 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.2□□□□□ -0.3
CCR9P51686 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.2□□□□□ -0.3
CCR9P51686 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CCR9P51686 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CCR9P51686 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.2□□□□□ -0.3
CCR9P51686 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.2□□□□□ -0.3
CCR9P51686 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCR9P51686 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.19□□□□□ -0.3
CCR9P51686 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCR9P51686 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.19□□□□□ -0.3
CCR9P51686 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CCR9P51686 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.19□□□□□ -0.3
CCR9P51686 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.19□□□□□ -0.3
CCR9P51686 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCR9P51686 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.19□□□□□ -0.3
CCR9P51686 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 AL356585.2-201ENST00000625078 2396 ntBASIC13.19□□□□□ -0.3
CCR9P51686 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCR9P51686 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.19□□□□□ -0.3
CCR9P51686 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
CCR9P51686 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.19□□□□□ -0.3
CCR9P51686 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
CCR9P51686 AC025678.2-201ENST00000562061 970 ntBASIC13.19□□□□□ -0.3
CCR9P51686 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.19□□□□□ -0.3
CCR9P51686 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.19□□□□□ -0.3
CCR9P51686 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCR9P51686 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.19□□□□□ -0.3
CCR9P51686 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CCR9P51686 AL158211.3-201ENST00000607385 239 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms