Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RNF144AP50876 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF144AP50876 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RNF144AP50876 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RNF144AP50876 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF144AP50876 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF144AP50876 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF144AP50876 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF144AP50876 AL442647.2-201ENST00000429864 857 ntBASIC13.97□□□□□ -0.17
RNF144AP50876 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF144AP50876 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF144AP50876 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF144AP50876 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.97□□□□□ -0.17
RNF144AP50876 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF144AP50876 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF144AP50876 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF144AP50876 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.97□□□□□ -0.17
RNF144AP50876 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.97□□□□□ -0.17
RNF144AP50876 TP53TG3HP-202ENST00000569755 579 ntBASIC13.97□□□□□ -0.17
RNF144AP50876 CLUHP6-201ENST00000580789 941 ntBASIC13.97□□□□□ -0.17
RNF144AP50876 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RNF144AP50876 TMEM261P1-201ENST00000604899 340 ntBASIC13.97□□□□□ -0.17
RNF144AP50876 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF144AP50876 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF144AP50876 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF144AP50876 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF144AP50876 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF144AP50876 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF144AP50876 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF144AP50876 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF144AP50876 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF144AP50876 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF144AP50876 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF144AP50876 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF144AP50876 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF144AP50876 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.96□□□□□ -0.17
RNF144AP50876 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF144AP50876 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RNF144AP50876 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
RNF144AP50876 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RNF144AP50876 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
RNF144AP50876 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.96□□□□□ -0.17
RNF144AP50876 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF144AP50876 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RNF144AP50876 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RNF144AP50876 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF144AP50876 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RNF144AP50876 AC018442.1-201ENST00000421439 2061 ntBASIC13.96□□□□□ -0.17
RNF144AP50876 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF144AP50876 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.96□□□□□ -0.17
RNF144AP50876 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF144AP50876 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.96□□□□□ -0.17
RNF144AP50876 KLF2P2-201ENST00000416807 1039 ntBASIC13.96□□□□□ -0.17
RNF144AP50876 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.96□□□□□ -0.17
RNF144AP50876 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.96□□□□□ -0.17
RNF144AP50876 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.96□□□□□ -0.17
RNF144AP50876 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF144AP50876 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.96□□□□□ -0.17
RNF144AP50876 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.96□□□□□ -0.17
RNF144AP50876 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.96□□□□□ -0.17
RNF144AP50876 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.96□□□□□ -0.17
RNF144AP50876 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.96□□□□□ -0.17
RNF144AP50876 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.96□□□□□ -0.17
RNF144AP50876 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RNF144AP50876 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF144AP50876 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF144AP50876 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF144AP50876 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.96□□□□□ -0.17
RNF144AP50876 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RNF144AP50876 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNF144AP50876 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RNF144AP50876 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
RNF144AP50876 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
RNF144AP50876 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.96□□□□□ -0.18
RNF144AP50876 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
RNF144AP50876 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.96□□□□□ -0.18
RNF144AP50876 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.96□□□□□ -0.18
RNF144AP50876 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 AP001267.2-201ENST00000532619 2086 ntBASIC13.95□□□□□ -0.18
RNF144AP50876 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF144AP50876 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF144AP50876 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RNF144AP50876 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RNF144AP50876 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RNF144AP50876 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF144AP50876 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RNF144AP50876 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.95□□□□□ -0.18
RNF144AP50876 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF144AP50876 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF144AP50876 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms