Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MIR4745-201ENST00000577608 62 ntBASIC13.35□□□□□ -0.27
SRP9P49458 AP000845.1-201ENST00000581677 2131 ntBASIC13.35□□□□□ -0.27
SRP9P49458 SRD5A3P1-201ENST00000603021 949 ntBASIC13.35□□□□□ -0.27
SRP9P49458 LINC01115-203ENST00000606068 577 ntBASIC13.35□□□□□ -0.27
SRP9P49458 AC004233.3-201ENST00000607794 1269 ntBASIC13.35□□□□□ -0.27
SRP9P49458 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.35□□□□□ -0.27
SRP9P49458 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.35□□□□□ -0.27
SRP9P49458 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.35□□□□□ -0.27
SRP9P49458 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SRP9P49458 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.35□□□□□ -0.27
SRP9P49458 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SRP9P49458 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SRP9P49458 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 AC138969.3-201ENST00000546612 1459 ntBASIC13.35□□□□□ -0.27
SRP9P49458 AC138932.2-201ENST00000548268 1459 ntBASIC13.35□□□□□ -0.27
SRP9P49458 AC126755.4-201ENST00000549796 1459 ntBASIC13.35□□□□□ -0.27
SRP9P49458 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SRP9P49458 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SRP9P49458 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SRP9P49458 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.34□□□□□ -0.27
SRP9P49458 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.34□□□□□ -0.27
SRP9P49458 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.34□□□□□ -0.27
SRP9P49458 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SRP9P49458 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.34□□□□□ -0.27
SRP9P49458 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SRP9P49458 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.34□□□□□ -0.27
SRP9P49458 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SRP9P49458 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.34□□□□□ -0.27
SRP9P49458 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.34□□□□□ -0.27
SRP9P49458 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.34□□□□□ -0.27
SRP9P49458 AC074338.1-201ENST00000416825 156 ntBASIC13.34□□□□□ -0.27
SRP9P49458 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.34□□□□□ -0.27
SRP9P49458 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.34□□□□□ -0.27
SRP9P49458 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.34□□□□□ -0.27
SRP9P49458 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.34□□□□□ -0.27
SRP9P49458 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.34□□□□□ -0.27
SRP9P49458 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.34□□□□□ -0.27
SRP9P49458 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
SRP9P49458 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.34□□□□□ -0.27
SRP9P49458 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SRP9P49458 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.34□□□□□ -0.27
SRP9P49458 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.34□□□□□ -0.27
SRP9P49458 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.34□□□□□ -0.27
SRP9P49458 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SRP9P49458 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.34□□□□□ -0.27
SRP9P49458 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SRP9P49458 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.34□□□□□ -0.27
SRP9P49458 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SRP9P49458 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.34□□□□□ -0.27
SRP9P49458 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.33□□□□□ -0.27
SRP9P49458 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.33□□□□□ -0.27
SRP9P49458 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
SRP9P49458 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
SRP9P49458 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
SRP9P49458 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SRP9P49458 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.33□□□□□ -0.28
SRP9P49458 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.33□□□□□ -0.28
SRP9P49458 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.33□□□□□ -0.28
SRP9P49458 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SRP9P49458 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRP9P49458 TOMM22P5-201ENST00000416399 439 ntBASIC13.33□□□□□ -0.28
SRP9P49458 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.33□□□□□ -0.28
SRP9P49458 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.33□□□□□ -0.28
SRP9P49458 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.33□□□□□ -0.28
SRP9P49458 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.33□□□□□ -0.28
SRP9P49458 UGT1A2P-201ENST00000454886 866 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms