Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA3P32297 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA3P32297 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA3P32297 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA3P32297 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.79■□□□□ 0.12
CHRNA3P32297 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA3P32297 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA3P32297 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CHRNA3P32297 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA3P32297 KRT8P22-201ENST00000562317 1415 ntBASIC15.79■□□□□ 0.12
CHRNA3P32297 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA3P32297 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA3P32297 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
CHRNA3P32297 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA3P32297 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA3P32297 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA3P32297 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA3P32297 U91328.1-201ENST00000437528 223 ntBASIC15.79■□□□□ 0.12
CHRNA3P32297 AC007389.4-201ENST00000454674 793 ntBASIC15.79■□□□□ 0.12
CHRNA3P32297 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.79■□□□□ 0.12
CHRNA3P32297 VDAC1P7-201ENST00000462417 847 ntBASIC15.79■□□□□ 0.12
CHRNA3P32297 AC004066.1-201ENST00000502488 802 ntBASIC15.79■□□□□ 0.12
CHRNA3P32297 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.79■□□□□ 0.12
CHRNA3P32297 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA3P32297 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.79■□□□□ 0.12
CHRNA3P32297 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA3P32297 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA3P32297 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.79■□□□□ 0.12
CHRNA3P32297 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.79■□□□□ 0.12
CHRNA3P32297 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA3P32297 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA3P32297 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA3P32297 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA3P32297 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRNA3P32297 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.79■□□□□ 0.12
CHRNA3P32297 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRNA3P32297 INTS4P2-202ENST00000614726 2019 ntBASIC15.78■□□□□ 0.12
CHRNA3P32297 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CHRNA3P32297 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CHRNA3P32297 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CHRNA3P32297 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRNA3P32297 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CHRNA3P32297 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.78■□□□□ 0.12
CHRNA3P32297 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.78■□□□□ 0.12
CHRNA3P32297 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 AL162726.2-201ENST00000438986 1017 ntBASIC15.78■□□□□ 0.12
CHRNA3P32297 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.78■□□□□ 0.12
CHRNA3P32297 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.78■□□□□ 0.12
CHRNA3P32297 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.78■□□□□ 0.12
CHRNA3P32297 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.78■□□□□ 0.12
CHRNA3P32297 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRNA3P32297 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.78■□□□□ 0.12
CHRNA3P32297 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.78■□□□□ 0.12
CHRNA3P32297 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.78■□□□□ 0.12
CHRNA3P32297 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CHRNA3P32297 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRNA3P32297 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRNA3P32297 CU634019.7-201ENST00000624153 1185 ntBASIC15.78■□□□□ 0.12
CHRNA3P32297 FP236241.2-201ENST00000624906 1185 ntBASIC15.78■□□□□ 0.12
CHRNA3P32297 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRNA3P32297 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 AL354702.1-201ENST00000442006 1960 ntBASIC15.78■□□□□ 0.12
CHRNA3P32297 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CHRNA3P32297 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CHRNA3P32297 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRNA3P32297 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA3P32297 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.77■□□□□ 0.12
CHRNA3P32297 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA3P32297 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA3P32297 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA3P32297 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.77■□□□□ 0.12
CHRNA3P32297 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA3P32297 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA3P32297 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA3P32297 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA3P32297 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA3P32297 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA3P32297 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.77■□□□□ 0.12
CHRNA3P32297 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRNA3P32297 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms