Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VAMP1P23763 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VAMP1P23763 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.71□□□□□ -0.37
VAMP1P23763 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.71□□□□□ -0.37
VAMP1P23763 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.71□□□□□ -0.37
VAMP1P23763 AC142381.1-201ENST00000426099 345 ntBASIC12.71□□□□□ -0.37
VAMP1P23763 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VAMP1P23763 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.71□□□□□ -0.37
VAMP1P23763 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.71□□□□□ -0.37
VAMP1P23763 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.71□□□□□ -0.37
VAMP1P23763 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.71□□□□□ -0.37
VAMP1P23763 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.71□□□□□ -0.37
VAMP1P23763 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.71□□□□□ -0.37
VAMP1P23763 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC12.71□□□□□ -0.37
VAMP1P23763 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VAMP1P23763 AC008267.7-201ENST00000624570 1194 ntBASIC12.71□□□□□ -0.37
VAMP1P23763 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.71□□□□□ -0.37
VAMP1P23763 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VAMP1P23763 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VAMP1P23763 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
VAMP1P23763 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VAMP1P23763 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VAMP1P23763 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VAMP1P23763 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
VAMP1P23763 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
VAMP1P23763 Z82170.1-201ENST00000625081 3192 ntBASIC12.71□□□□□ -0.38
VAMP1P23763 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VAMP1P23763 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VAMP1P23763 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
VAMP1P23763 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VAMP1P23763 AC016397.2-201ENST00000624848 1985 ntBASIC12.7□□□□□ -0.38
VAMP1P23763 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
VAMP1P23763 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.7□□□□□ -0.38
VAMP1P23763 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.7□□□□□ -0.38
VAMP1P23763 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.7□□□□□ -0.38
VAMP1P23763 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
VAMP1P23763 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.7□□□□□ -0.38
VAMP1P23763 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.7□□□□□ -0.38
VAMP1P23763 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.7□□□□□ -0.38
VAMP1P23763 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
VAMP1P23763 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.7□□□□□ -0.38
VAMP1P23763 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.7□□□□□ -0.38
VAMP1P23763 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.7□□□□□ -0.38
VAMP1P23763 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.7□□□□□ -0.38
VAMP1P23763 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.7□□□□□ -0.38
VAMP1P23763 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC12.7□□□□□ -0.38
VAMP1P23763 AC112191.1-201ENST00000523689 701 ntBASIC12.7□□□□□ -0.38
VAMP1P23763 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.7□□□□□ -0.38
VAMP1P23763 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.7□□□□□ -0.38
VAMP1P23763 KRT19P2-202ENST00000557173 1012 ntBASIC12.7□□□□□ -0.38
VAMP1P23763 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
VAMP1P23763 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.7□□□□□ -0.38
VAMP1P23763 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC12.7□□□□□ -0.38
VAMP1P23763 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
VAMP1P23763 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.7□□□□□ -0.38
VAMP1P23763 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.7□□□□□ -0.38
VAMP1P23763 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.7□□□□□ -0.38
VAMP1P23763 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.7□□□□□ -0.38
VAMP1P23763 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VAMP1P23763 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VAMP1P23763 LILRP1-201ENST00000444199 1370 ntBASIC12.69□□□□□ -0.38
VAMP1P23763 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
VAMP1P23763 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
VAMP1P23763 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VAMP1P23763 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
VAMP1P23763 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VAMP1P23763 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VAMP1P23763 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
VAMP1P23763 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
VAMP1P23763 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VAMP1P23763 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.69□□□□□ -0.38
VAMP1P23763 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
VAMP1P23763 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
VAMP1P23763 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VAMP1P23763 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms