Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.53□□□□□ -0.56
RAB4AP20338 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.53□□□□□ -0.56
RAB4AP20338 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC11.53□□□□□ -0.56
RAB4AP20338 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC11.53□□□□□ -0.56
RAB4AP20338 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.53□□□□□ -0.56
RAB4AP20338 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
RAB4AP20338 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC11.53□□□□□ -0.56
RAB4AP20338 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.53□□□□□ -0.56
RAB4AP20338 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
RAB4AP20338 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.53□□□□□ -0.56
RAB4AP20338 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
RAB4AP20338 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
RAB4AP20338 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.53□□□□□ -0.56
RAB4AP20338 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.53□□□□□ -0.56
RAB4AP20338 AC138894.3-201ENST00000603787 634 ntBASIC11.53□□□□□ -0.56
RAB4AP20338 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC11.53□□□□□ -0.56
RAB4AP20338 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
RAB4AP20338 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.53□□□□□ -0.56
RAB4AP20338 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
RAB4AP20338 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.53□□□□□ -0.56
RAB4AP20338 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
RAB4AP20338 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
RAB4AP20338 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.53□□□□□ -0.56
RAB4AP20338 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC11.53□□□□□ -0.56
RAB4AP20338 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
RAB4AP20338 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RAB4AP20338 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
RAB4AP20338 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.52□□□□□ -0.56
RAB4AP20338 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
RAB4AP20338 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.52□□□□□ -0.56
RAB4AP20338 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.52□□□□□ -0.56
RAB4AP20338 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.52□□□□□ -0.56
RAB4AP20338 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RAB4AP20338 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
RAB4AP20338 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC11.52□□□□□ -0.56
RAB4AP20338 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
RAB4AP20338 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.52□□□□□ -0.56
RAB4AP20338 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC11.52□□□□□ -0.56
RAB4AP20338 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
RAB4AP20338 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RAB4AP20338 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
RAB4AP20338 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
RAB4AP20338 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RAB4AP20338 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
RAB4AP20338 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.52□□□□□ -0.56
RAB4AP20338 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RAB4AP20338 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RAB4AP20338 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
RAB4AP20338 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RAB4AP20338 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB4AP20338 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB4AP20338 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.52□□□□□ -0.57
RAB4AP20338 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB4AP20338 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RAB4AP20338 TXLNA-202ENST00000373610 4854 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB4AP20338 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB4AP20338 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB4AP20338 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
RAB4AP20338 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
RAB4AP20338 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB4AP20338 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.52□□□□□ -0.57
RAB4AP20338 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RAB4AP20338 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.52□□□□□ -0.57
RAB4AP20338 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.52□□□□□ -0.57
RAB4AP20338 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.52□□□□□ -0.57
RAB4AP20338 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.52□□□□□ -0.57
RAB4AP20338 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
RAB4AP20338 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
RAB4AP20338 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.52□□□□□ -0.57
RAB4AP20338 AC008667.4-201ENST00000607370 168 ntBASIC11.52□□□□□ -0.57
RAB4AP20338 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.52□□□□□ -0.57
RAB4AP20338 AL355877.3-201ENST00000622820 899 ntBASIC11.52□□□□□ -0.57
RAB4AP20338 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB4AP20338 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
RAB4AP20338 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RAB4AP20338 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
RAB4AP20338 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
RAB4AP20338 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RAB4AP20338 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RAB4AP20338 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms