Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.39■□□□□ 0.21
SMPD1P17405 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SMPD1P17405 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
SMPD1P17405 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SMPD1P17405 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.39■□□□□ 0.21
SMPD1P17405 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SMPD1P17405 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.39■□□□□ 0.21
SMPD1P17405 AL807761.2-201ENST00000422849 729 ntBASIC16.39■□□□□ 0.21
SMPD1P17405 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.39■□□□□ 0.21
SMPD1P17405 RPL7P35-201ENST00000446943 740 ntBASIC16.39■□□□□ 0.21
SMPD1P17405 DUTP3-201ENST00000450025 415 ntBASIC16.39■□□□□ 0.21
SMPD1P17405 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.39■□□□□ 0.21
SMPD1P17405 AC130709.1-201ENST00000484779 1212 ntBASIC16.39■□□□□ 0.21
SMPD1P17405 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.39■□□□□ 0.21
SMPD1P17405 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SMPD1P17405 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SMPD1P17405 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SMPD1P17405 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.39■□□□□ 0.21
SMPD1P17405 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.39■□□□□ 0.21
SMPD1P17405 DNM1P30-201ENST00000563586 452 ntBASIC16.39■□□□□ 0.21
SMPD1P17405 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.39■□□□□ 0.21
SMPD1P17405 AC093752.3-201ENST00000567343 901 ntBASIC16.39■□□□□ 0.21
SMPD1P17405 RPL17P45-201ENST00000586289 509 ntBASIC16.39■□□□□ 0.21
SMPD1P17405 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.39■□□□□ 0.21
SMPD1P17405 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.39■□□□□ 0.21
SMPD1P17405 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
SMPD1P17405 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
SMPD1P17405 AC006504.5-208ENST00000588784 2401 ntBASIC16.39■□□□□ 0.21
SMPD1P17405 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SMPD1P17405 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.39■□□□□ 0.21
SMPD1P17405 LINC00554-201ENST00000564841 3011 ntBASIC16.39■□□□□ 0.21
SMPD1P17405 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.39■□□□□ 0.21
SMPD1P17405 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SMPD1P17405 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SMPD1P17405 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.39■□□□□ 0.21
SMPD1P17405 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMPD1P17405 PPT1-215ENST00000641471 2368 ntBASIC16.38■□□□□ 0.21
SMPD1P17405 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SMPD1P17405 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SMPD1P17405 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SMPD1P17405 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 KRT8P31-201ENST00000504812 1408 ntBASIC16.38■□□□□ 0.21
SMPD1P17405 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.38■□□□□ 0.21
SMPD1P17405 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SMPD1P17405 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SMPD1P17405 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SMPD1P17405 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.38■□□□□ 0.21
SMPD1P17405 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.38■□□□□ 0.21
SMPD1P17405 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.38■□□□□ 0.21
SMPD1P17405 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.38■□□□□ 0.21
SMPD1P17405 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.38■□□□□ 0.21
SMPD1P17405 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SMPD1P17405 AC007326.1-201ENST00000604539 458 ntBASIC16.38■□□□□ 0.21
SMPD1P17405 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SMPD1P17405 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SMPD1P17405 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SMPD1P17405 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.38■□□□□ 0.21
SMPD1P17405 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.38■□□□□ 0.21
SMPD1P17405 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.38■□□□□ 0.21
SMPD1P17405 AC008741.2-201ENST00000612792 3115 ntBASIC16.38■□□□□ 0.21
SMPD1P17405 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMPD1P17405 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.38■□□□□ 0.21
SMPD1P17405 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SMPD1P17405 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SMPD1P17405 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms