Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2AFXP16104 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.48■□□□□ 0.07
H2AFXP16104 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
H2AFXP16104 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2AFXP16104 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
H2AFXP16104 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
H2AFXP16104 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
H2AFXP16104 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
H2AFXP16104 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2AFXP16104 AC009474.1-201ENST00000455096 1565 ntBASIC15.48■□□□□ 0.07
H2AFXP16104 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.48■□□□□ 0.07
H2AFXP16104 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.48■□□□□ 0.07
H2AFXP16104 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2AFXP16104 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
H2AFXP16104 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.48■□□□□ 0.07
H2AFXP16104 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2AFXP16104 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2AFXP16104 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
H2AFXP16104 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.48■□□□□ 0.07
H2AFXP16104 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.48■□□□□ 0.07
H2AFXP16104 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
H2AFXP16104 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2AFXP16104 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
H2AFXP16104 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.47■□□□□ 0.07
H2AFXP16104 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
H2AFXP16104 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC15.47■□□□□ 0.07
H2AFXP16104 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
H2AFXP16104 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
H2AFXP16104 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.47■□□□□ 0.07
H2AFXP16104 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.47■□□□□ 0.07
H2AFXP16104 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.47■□□□□ 0.07
H2AFXP16104 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.47■□□□□ 0.07
H2AFXP16104 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC15.47■□□□□ 0.07
H2AFXP16104 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
H2AFXP16104 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.47■□□□□ 0.07
H2AFXP16104 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.47■□□□□ 0.07
H2AFXP16104 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
H2AFXP16104 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
H2AFXP16104 IFNL4P1-201ENST00000607083 540 ntBASIC15.47■□□□□ 0.07
H2AFXP16104 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
H2AFXP16104 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
H2AFXP16104 SLC9A3P3-201ENST00000457608 2229 ntBASIC15.47■□□□□ 0.07
H2AFXP16104 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2AFXP16104 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.47■□□□□ 0.07
H2AFXP16104 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
H2AFXP16104 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC15.47■□□□□ 0.07
H2AFXP16104 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2AFXP16104 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2AFXP16104 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
H2AFXP16104 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
H2AFXP16104 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC15.46■□□□□ 0.07
H2AFXP16104 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
H2AFXP16104 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2AFXP16104 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2AFXP16104 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
H2AFXP16104 AL445250.1-201ENST00000641671 2259 ntBASIC15.46■□□□□ 0.07
H2AFXP16104 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2AFXP16104 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2AFXP16104 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2AFXP16104 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
H2AFXP16104 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
H2AFXP16104 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
H2AFXP16104 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
H2AFXP16104 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2AFXP16104 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
H2AFXP16104 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.46■□□□□ 0.07
H2AFXP16104 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.46■□□□□ 0.07
H2AFXP16104 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.46■□□□□ 0.07
H2AFXP16104 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.46■□□□□ 0.07
H2AFXP16104 RNPS1P1-201ENST00000507437 918 ntBASIC15.46■□□□□ 0.07
H2AFXP16104 AC073648.2-201ENST00000510116 352 ntBASIC15.46■□□□□ 0.07
H2AFXP16104 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.46■□□□□ 0.07
H2AFXP16104 AC034105.1-201ENST00000563488 319 ntBASIC15.46■□□□□ 0.07
H2AFXP16104 RARRES2P8-201ENST00000566335 367 ntBASIC15.46■□□□□ 0.07
H2AFXP16104 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.46■□□□□ 0.07
H2AFXP16104 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.46■□□□□ 0.07
H2AFXP16104 TP73-AS1-207ENST00000624167 988 ntBASIC15.46■□□□□ 0.07
H2AFXP16104 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
H2AFXP16104 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
H2AFXP16104 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC15.46■□□□□ 0.07
H2AFXP16104 AC007326.2-201ENST00000624224 7579 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms