Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL11A1P12107 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.54■□□□□ 0.24
COL11A1P12107 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL11A1P12107 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL11A1P12107 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL11A1P12107 HTR7P1-202ENST00000624664 4411 ntBASIC16.54■□□□□ 0.24
COL11A1P12107 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL11A1P12107 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL11A1P12107 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL11A1P12107 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL11A1P12107 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL11A1P12107 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
COL11A1P12107 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL11A1P12107 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.54■□□□□ 0.24
COL11A1P12107 AC026410.1-201ENST00000507366 1101 ntBASIC16.54■□□□□ 0.24
COL11A1P12107 AC022447.6-201ENST00000515522 438 ntBASIC16.54■□□□□ 0.24
COL11A1P12107 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL11A1P12107 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.54■□□□□ 0.24
COL11A1P12107 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.54■□□□□ 0.24
COL11A1P12107 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.54■□□□□ 0.24
COL11A1P12107 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
COL11A1P12107 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL11A1P12107 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
COL11A1P12107 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.53■□□□□ 0.24
COL11A1P12107 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
COL11A1P12107 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.53■□□□□ 0.24
COL11A1P12107 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.53■□□□□ 0.24
COL11A1P12107 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.53■□□□□ 0.24
COL11A1P12107 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
COL11A1P12107 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.53■□□□□ 0.24
COL11A1P12107 AGGF1P1-201ENST00000509500 2073 ntBASIC16.53■□□□□ 0.24
COL11A1P12107 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
COL11A1P12107 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
COL11A1P12107 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
COL11A1P12107 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
COL11A1P12107 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
COL11A1P12107 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.53■□□□□ 0.24
COL11A1P12107 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 AC004837.1-201ENST00000446267 564 ntBASIC16.53■□□□□ 0.24
COL11A1P12107 RPL7P35-201ENST00000446943 740 ntBASIC16.53■□□□□ 0.24
COL11A1P12107 DUX4L50-201ENST00000455245 715 ntBASIC16.53■□□□□ 0.24
COL11A1P12107 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.53■□□□□ 0.24
COL11A1P12107 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.53■□□□□ 0.24
COL11A1P12107 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.53■□□□□ 0.24
COL11A1P12107 AC021016.3-201ENST00000608367 477 ntBASIC16.53■□□□□ 0.24
COL11A1P12107 AL161773.1-201ENST00000624845 863 ntBASIC16.53■□□□□ 0.24
COL11A1P12107 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.53■□□□□ 0.24
COL11A1P12107 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.53■□□□□ 0.24
COL11A1P12107 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
COL11A1P12107 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL11A1P12107 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL11A1P12107 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL11A1P12107 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL11A1P12107 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
COL11A1P12107 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
COL11A1P12107 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL11A1P12107 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL11A1P12107 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.52■□□□□ 0.24
COL11A1P12107 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.52■□□□□ 0.24
COL11A1P12107 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL11A1P12107 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.52■□□□□ 0.24
COL11A1P12107 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.52■□□□□ 0.24
COL11A1P12107 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.52■□□□□ 0.24
COL11A1P12107 KLF17P1-201ENST00000547105 1126 ntBASIC16.52■□□□□ 0.24
COL11A1P12107 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
COL11A1P12107 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
COL11A1P12107 NUDT4P2-201ENST00000578341 546 ntBASIC16.52■□□□□ 0.24
COL11A1P12107 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL11A1P12107 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL11A1P12107 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.52■□□□□ 0.24
COL11A1P12107 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL11A1P12107 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL11A1P12107 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL11A1P12107 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL11A1P12107 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL11A1P12107 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.52■□□□□ 0.24
COL11A1P12107 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL11A1P12107 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
COL11A1P12107 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
COL11A1P12107 AC064801.2-201ENST00000625052 1303 ntBASIC16.52■□□□□ 0.23
COL11A1P12107 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms