Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
TCRAP04437 CD82-202ENST00000342935 967 ntTSL 5 BASIC11.41□□□□□ -0.58
TCRAP04437 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC11.41□□□□□ -0.58
TCRAP04437 GPS2P2-201ENST00000430745 888 ntBASIC11.41□□□□□ -0.58
TCRAP04437 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
TCRAP04437 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.41□□□□□ -0.58
TCRAP04437 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.41□□□□□ -0.58
TCRAP04437 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.41□□□□□ -0.58
TCRAP04437 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC11.41□□□□□ -0.58
TCRAP04437 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC11.41□□□□□ -0.58
TCRAP04437 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.41□□□□□ -0.58
TCRAP04437 MIR4453-201ENST00000584019 89 ntBASIC11.41□□□□□ -0.58
TCRAP04437 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.41□□□□□ -0.58
TCRAP04437 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
TCRAP04437 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
TCRAP04437 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.41□□□□□ -0.58
TCRAP04437 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
TCRAP04437 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.41□□□□□ -0.58
TCRAP04437 PPT1-213ENST00000641319 2388 ntBASIC11.41□□□□□ -0.58
TCRAP04437 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
TCRAP04437 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
TCRAP04437 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
TCRAP04437 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.41□□□□□ -0.58
TCRAP04437 GOLGA6L17P-202ENST00000614358 1398 ntBASIC11.41□□□□□ -0.58
TCRAP04437 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TCRAP04437 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
TCRAP04437 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.4□□□□□ -0.58
TCRAP04437 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
TCRAP04437 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.4□□□□□ -0.58
TCRAP04437 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.4□□□□□ -0.58
TCRAP04437 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.4□□□□□ -0.58
TCRAP04437 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
TCRAP04437 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
TCRAP04437 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
TCRAP04437 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11.4□□□□□ -0.58
TCRAP04437 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.4□□□□□ -0.58
TCRAP04437 AC004832.2-201ENST00000426397 482 ntBASIC11.4□□□□□ -0.58
TCRAP04437 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
TCRAP04437 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 CEND1P1-201ENST00000451006 455 ntBASIC11.4□□□□□ -0.58
TCRAP04437 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.4□□□□□ -0.58
TCRAP04437 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC11.4□□□□□ -0.58
TCRAP04437 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.4□□□□□ -0.58
TCRAP04437 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.4□□□□□ -0.58
TCRAP04437 ALG1L5P-201ENST00000482043 771 ntBASIC11.4□□□□□ -0.58
TCRAP04437 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC11.4□□□□□ -0.58
TCRAP04437 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC11.4□□□□□ -0.58
TCRAP04437 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.4□□□□□ -0.58
TCRAP04437 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.4□□□□□ -0.58
TCRAP04437 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.4□□□□□ -0.58
TCRAP04437 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11.4□□□□□ -0.58
TCRAP04437 MTDHP5-201ENST00000598980 586 ntBASIC11.4□□□□□ -0.58
TCRAP04437 AC120114.3-201ENST00000611923 658 ntBASIC11.4□□□□□ -0.58
TCRAP04437 AL513210.1-201ENST00000629608 234 ntBASIC11.4□□□□□ -0.58
TCRAP04437 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11.4□□□□□ -0.58
TCRAP04437 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.4□□□□□ -0.58
TCRAP04437 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
TCRAP04437 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
TCRAP04437 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.4□□□□□ -0.58
TCRAP04437 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
TCRAP04437 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
TCRAP04437 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
TCRAP04437 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
TCRAP04437 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.4□□□□□ -0.58
TCRAP04437 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC11.4□□□□□ -0.58
TCRAP04437 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TCRAP04437 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TCRAP04437 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms