Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBB4AP04350 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB4AP04350 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB4AP04350 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TUBB4AP04350 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB4AP04350 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TUBB4AP04350 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBB4AP04350 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBB4AP04350 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB4AP04350 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBB4AP04350 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB4AP04350 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TUBB4AP04350 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBB4AP04350 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBB4AP04350 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.04■□□□□ 0.16
TUBB4AP04350 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB4AP04350 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBB4AP04350 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB4AP04350 AC105021.1-202ENST00000570572 669 ntBASIC16.04■□□□□ 0.16
TUBB4AP04350 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.04■□□□□ 0.16
TUBB4AP04350 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TUBB4AP04350 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TUBB4AP04350 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.04■□□□□ 0.16
TUBB4AP04350 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.04■□□□□ 0.16
TUBB4AP04350 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB4AP04350 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBB4AP04350 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBB4AP04350 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB4AP04350 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TUBB4AP04350 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB4AP04350 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB4AP04350 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBB4AP04350 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB4AP04350 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB4AP04350 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB4AP04350 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBB4AP04350 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBB4AP04350 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBB4AP04350 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TUBB4AP04350 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
TUBB4AP04350 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBB4AP04350 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBB4AP04350 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBB4AP04350 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBB4AP04350 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TUBB4AP04350 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TUBB4AP04350 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBB4AP04350 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBB4AP04350 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
TUBB4AP04350 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TUBB4AP04350 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TUBB4AP04350 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBB4AP04350 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBB4AP04350 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBB4AP04350 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 AP002761.4-201ENST00000565433 3361 ntBASIC16.03■□□□□ 0.16
TUBB4AP04350 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBB4AP04350 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBB4AP04350 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
TUBB4AP04350 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBB4AP04350 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TUBB4AP04350 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBB4AP04350 MKRN5P-201ENST00000445263 1467 ntBASIC16.03■□□□□ 0.16
TUBB4AP04350 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TUBB4AP04350 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBB4AP04350 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TUBB4AP04350 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB4AP04350 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB4AP04350 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB4AP04350 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB4AP04350 ZNF259P1-201ENST00000407656 1365 ntBASIC16.02■□□□□ 0.16
TUBB4AP04350 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TUBB4AP04350 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TUBB4AP04350 AL157414.3-201ENST00000624276 1954 ntBASIC16.02■□□□□ 0.16
TUBB4AP04350 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC16.02■□□□□ 0.16
TUBB4AP04350 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB4AP04350 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TUBB4AP04350 AL137783.1-201ENST00000623494 1896 ntBASIC16.02■□□□□ 0.16
TUBB4AP04350 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB4AP04350 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB4AP04350 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB4AP04350 AC136604.1-202ENST00000425471 771 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms