Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.54□□□□□ -0.4
SIX6O95475 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.54□□□□□ -0.4
SIX6O95475 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.54□□□□□ -0.4
SIX6O95475 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SIX6O95475 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.53□□□□□ -0.4
SIX6O95475 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 AP002761.4-201ENST00000565433 3361 ntBASIC12.53□□□□□ -0.4
SIX6O95475 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.53□□□□□ -0.4
SIX6O95475 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.53□□□□□ -0.4
SIX6O95475 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SIX6O95475 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.53□□□□□ -0.4
SIX6O95475 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SIX6O95475 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SIX6O95475 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SIX6O95475 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SIX6O95475 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.53□□□□□ -0.4
SIX6O95475 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 VENTXP1-201ENST00000569334 2716 ntBASIC12.53□□□□□ -0.4
SIX6O95475 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SIX6O95475 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.53□□□□□ -0.4
SIX6O95475 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.53□□□□□ -0.4
SIX6O95475 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.53□□□□□ -0.4
SIX6O95475 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 AC104457.1-201ENST00000401024 814 ntBASIC12.53□□□□□ -0.4
SIX6O95475 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
SIX6O95475 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.53□□□□□ -0.4
SIX6O95475 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.53□□□□□ -0.4
SIX6O95475 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.53□□□□□ -0.4
SIX6O95475 AC105233.2-201ENST00000523697 349 ntBASIC12.53□□□□□ -0.4
SIX6O95475 AF228730.5-201ENST00000530288 346 ntBASIC12.53□□□□□ -0.4
SIX6O95475 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.53□□□□□ -0.4
SIX6O95475 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.53□□□□□ -0.4
SIX6O95475 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.53□□□□□ -0.4
SIX6O95475 REXO1L6P-202ENST00000619970 1078 ntBASIC12.53□□□□□ -0.4
SIX6O95475 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.53□□□□□ -0.4
SIX6O95475 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SIX6O95475 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SIX6O95475 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SIX6O95475 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.53□□□□□ -0.4
SIX6O95475 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SIX6O95475 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.53□□□□□ -0.4
SIX6O95475 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
SIX6O95475 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SIX6O95475 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SIX6O95475 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SIX6O95475 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.52□□□□□ -0.4
SIX6O95475 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SIX6O95475 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
SIX6O95475 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SIX6O95475 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SIX6O95475 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
SIX6O95475 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.52□□□□□ -0.4
SIX6O95475 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SIX6O95475 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SIX6O95475 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SIX6O95475 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SIX6O95475 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.52□□□□□ -0.4
SIX6O95475 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.52□□□□□ -0.4
SIX6O95475 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SIX6O95475 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms