Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.74□□□□□ -0.21
NKX2-2O95096 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.74□□□□□ -0.21
NKX2-2O95096 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
NKX2-2O95096 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NKX2-2O95096 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NKX2-2O95096 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.74□□□□□ -0.21
NKX2-2O95096 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.74□□□□□ -0.21
NKX2-2O95096 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.74□□□□□ -0.21
NKX2-2O95096 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
NKX2-2O95096 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.74□□□□□ -0.21
NKX2-2O95096 BOLA2P3-201ENST00000404566 256 ntBASIC13.74□□□□□ -0.21
NKX2-2O95096 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.74□□□□□ -0.21
NKX2-2O95096 PUDPP3-201ENST00000445368 636 ntBASIC13.74□□□□□ -0.21
NKX2-2O95096 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.74□□□□□ -0.21
NKX2-2O95096 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.74□□□□□ -0.21
NKX2-2O95096 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.74□□□□□ -0.21
NKX2-2O95096 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.74□□□□□ -0.21
NKX2-2O95096 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.74□□□□□ -0.21
NKX2-2O95096 RN7SL713P-201ENST00000582127 302 ntBASIC13.74□□□□□ -0.21
NKX2-2O95096 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NKX2-2O95096 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.74□□□□□ -0.21
NKX2-2O95096 RHOXF1P1-202ENST00000635473 501 ntBASIC13.74□□□□□ -0.21
NKX2-2O95096 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 AC015688.4-201ENST00000580780 1647 ntBASIC13.74□□□□□ -0.21
NKX2-2O95096 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
NKX2-2O95096 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.74□□□□□ -0.21
NKX2-2O95096 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NKX2-2O95096 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NKX2-2O95096 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NKX2-2O95096 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-2O95096 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX2-2O95096 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX2-2O95096 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX2-2O95096 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX2-2O95096 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX2-2O95096 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.73□□□□□ -0.21
NKX2-2O95096 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NKX2-2O95096 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NKX2-2O95096 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NKX2-2O95096 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 RPL7P3-201ENST00000441388 714 ntBASIC13.73□□□□□ -0.21
NKX2-2O95096 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.73□□□□□ -0.21
NKX2-2O95096 CROCCP4-201ENST00000457096 498 ntBASIC13.73□□□□□ -0.21
NKX2-2O95096 COX5BP1-201ENST00000507622 393 ntBASIC13.73□□□□□ -0.21
NKX2-2O95096 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.73□□□□□ -0.21
NKX2-2O95096 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.73□□□□□ -0.21
NKX2-2O95096 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.73□□□□□ -0.21
NKX2-2O95096 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX2-2O95096 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.73□□□□□ -0.21
NKX2-2O95096 AC073413.1-201ENST00000603927 732 ntBASIC13.73□□□□□ -0.21
NKX2-2O95096 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.73□□□□□ -0.21
NKX2-2O95096 AL162274.1-201ENST00000617191 1098 ntBASIC13.73□□□□□ -0.21
NKX2-2O95096 AC002472.3-201ENST00000640124 621 ntBASIC13.73□□□□□ -0.21
NKX2-2O95096 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 AL590440.2-201ENST00000641973 1595 ntBASIC13.73□□□□□ -0.21
NKX2-2O95096 AC139712.1-201ENST00000378256 1875 ntBASIC13.73□□□□□ -0.21
NKX2-2O95096 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.73□□□□□ -0.21
NKX2-2O95096 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NKX2-2O95096 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.73□□□□□ -0.21
NKX2-2O95096 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms